Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.18■□□□□ 0.5
IFRD1O00458 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.18■□□□□ 0.5
IFRD1O00458 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
IFRD1O00458 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 HOXB1-202ENST00000577092 1414 ntBASIC18.18■□□□□ 0.5
IFRD1O00458 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 RNF152P1-201ENST00000397754 604 ntBASIC18.18■□□□□ 0.5
IFRD1O00458 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.18■□□□□ 0.5
IFRD1O00458 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.18■□□□□ 0.5
IFRD1O00458 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.18■□□□□ 0.5
IFRD1O00458 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.18■□□□□ 0.5
IFRD1O00458 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.18■□□□□ 0.5
IFRD1O00458 LINC01238-205ENST00000567549 1107 ntBASIC18.18■□□□□ 0.5
IFRD1O00458 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 AC006011.2-201ENST00000621313 1158 ntBASIC18.18■□□□□ 0.5
IFRD1O00458 MYC-208ENST00000641036 567 ntBASIC18.18■□□□□ 0.5
IFRD1O00458 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.18■□□□□ 0.5
IFRD1O00458 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.18■□□□□ 0.5
IFRD1O00458 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
IFRD1O00458 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
IFRD1O00458 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFRD1O00458 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.17■□□□□ 0.5
IFRD1O00458 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
IFRD1O00458 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
IFRD1O00458 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IFRD1O00458 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.17■□□□□ 0.5
IFRD1O00458 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IFRD1O00458 AC104076.2-201ENST00000448912 469 ntBASIC18.17■□□□□ 0.5
IFRD1O00458 AC092647.4-201ENST00000457211 535 ntBASIC18.17■□□□□ 0.5
IFRD1O00458 AL049597.2-201ENST00000565575 961 ntBASIC18.17■□□□□ 0.5
IFRD1O00458 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.17■□□□□ 0.5
IFRD1O00458 AC024243.1-201ENST00000609234 778 ntBASIC18.17■□□□□ 0.5
IFRD1O00458 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
IFRD1O00458 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.17■□□□□ 0.5
IFRD1O00458 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
IFRD1O00458 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IFRD1O00458 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.17■□□□□ 0.5
IFRD1O00458 LETM1P2-201ENST00000597330 2178 ntBASIC18.17■□□□□ 0.5
IFRD1O00458 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.17■□□□□ 0.5
IFRD1O00458 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
IFRD1O00458 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFRD1O00458 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.16■□□□□ 0.5
IFRD1O00458 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
IFRD1O00458 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.16■□□□□ 0.5
IFRD1O00458 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.16■□□□□ 0.5
IFRD1O00458 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
IFRD1O00458 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.16■□□□□ 0.5
IFRD1O00458 DUX4L26-201ENST00000489078 1255 ntBASIC18.16■□□□□ 0.5
IFRD1O00458 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.16■□□□□ 0.5
IFRD1O00458 AC011558.1-201ENST00000623459 338 ntBASIC18.16■□□□□ 0.5
IFRD1O00458 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.16■□□□□ 0.5
IFRD1O00458 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
IFRD1O00458 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
IFRD1O00458 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
IFRD1O00458 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFRD1O00458 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms