Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.62■□□□□ 0.73
O00370 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.62■□□□□ 0.73
O00370 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.62■□□□□ 0.73
O00370 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
O00370 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
O00370 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
O00370 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
O00370 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.61■□□□□ 0.73
O00370 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.61■□□□□ 0.73
O00370 AC104076.2-201ENST00000448912 469 ntBASIC19.61■□□□□ 0.73
O00370 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.61■□□□□ 0.73
O00370 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 AC010240.3-201ENST00000607688 395 ntBASIC19.61■□□□□ 0.73
O00370 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
O00370 AL031432.5-201ENST00000641059 760 ntBASIC19.61■□□□□ 0.73
O00370 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
O00370 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.61■□□□□ 0.73
O00370 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 AL163051.1-201ENST00000569214 1512 ntBASIC19.61■□□□□ 0.73
O00370 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.61■□□□□ 0.73
O00370 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
O00370 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.6■□□□□ 0.73
O00370 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.6■□□□□ 0.73
O00370 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.6■□□□□ 0.73
O00370 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.6■□□□□ 0.73
O00370 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.6■□□□□ 0.73
O00370 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
O00370 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
O00370 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
O00370 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
O00370 TMPOP1-202ENST00000424642 1267 ntBASIC19.6■□□□□ 0.73
O00370 KRT18P21-201ENST00000515767 1272 ntBASIC19.6■□□□□ 0.73
O00370 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.6■□□□□ 0.73
O00370 MIR3180-4-201ENST00000582223 153 ntBASIC19.6■□□□□ 0.73
O00370 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.6■□□□□ 0.73
O00370 AC140113.3-201ENST00000605663 199 ntBASIC19.6■□□□□ 0.73
O00370 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
O00370 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
O00370 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
O00370 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.6■□□□□ 0.73
O00370 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
O00370 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
O00370 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
O00370 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.59■□□□□ 0.73
O00370 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.59■□□□□ 0.73
O00370 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.59■□□□□ 0.73
O00370 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.59■□□□□ 0.73
O00370 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.59■□□□□ 0.73
O00370 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.59■□□□□ 0.73
O00370 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
O00370 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
O00370 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.59■□□□□ 0.73
O00370 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.58■□□□□ 0.73
O00370 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
O00370 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
O00370 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
O00370 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.58■□□□□ 0.72
O00370 FAM210CP-201ENST00000445714 574 ntBASIC19.58■□□□□ 0.72
O00370 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.58■□□□□ 0.72
O00370 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.58■□□□□ 0.72
O00370 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.58■□□□□ 0.72
O00370 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
O00370 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
O00370 MIR3917-201ENST00000580971 93 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms