Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA9Q9Y5G4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 AP000867.3-201ENST00000524675 377 ntBASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 AC104390.1-201ENST00000555663 520 ntBASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 AC090616.6-201ENST00000582640 721 ntBASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA9Q9Y5G4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 KRT18P23-201ENST00000435622 1283 ntBASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 RNF126P1-202ENST00000569893 925 ntBASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA9Q9Y5G4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 PVRIG2P-201ENST00000435460 978 ntBASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 EMBP1-201ENST00000458200 901 ntBASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 TOB2P1-201ENST00000469761 992 ntBASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 AL160237.2-201ENST00000556165 472 ntBASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDHGA9Q9Y5G4 AC010240.3-201ENST00000607688 395 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms