Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.83■□□□□ 0.28
ERGIC3Q9Y282 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ERGIC3Q9Y282 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
ERGIC3Q9Y282 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
ERGIC3Q9Y282 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 AC093787.1-201ENST00000450396 207 ntBASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
ERGIC3Q9Y282 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 AC034268.1-201ENST00000441047 882 ntBASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 AL499627.1-201ENST00000569373 2188 ntBASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 CROCCP1-201ENST00000426910 5675 ntBASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERGIC3Q9Y282 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERGIC3Q9Y282 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms