Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RABGEF1Q9UJ41 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RABGEF1Q9UJ41 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 AC104076.2-201ENST00000448912 469 ntBASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 AC130371.2-201ENST00000619443 611 ntBASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 ESPNP-201ENST00000270691 2015 ntBASIC18.9■□□□□ 0.62
RABGEF1Q9UJ41 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RABGEF1Q9UJ41 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.89■□□□□ 0.62
RABGEF1Q9UJ41 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RABGEF1Q9UJ41 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 AL357033.4-201ENST00000617703 1807 ntBASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 C2orf69P3-201ENST00000565542 1120 ntBASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RABGEF1Q9UJ41 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 TSPY14P-201ENST00000303979 915 ntBASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 SLC25A1P4-201ENST00000567977 778 ntBASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 AC011298.2-201ENST00000617989 482 ntBASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 KRT8P3-201ENST00000519669 1449 ntBASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 AC093677.2-201ENST00000600169 1863 ntBASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RABGEF1Q9UJ41 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms