Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF4Q9NR80 AC009113.1-201ENST00000570267 2443 ntBASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 AC126763.1-201ENST00000552015 2118 ntBASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 RASA4DP-201ENST00000460726 1199 ntBASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 MIR3180-5-201ENST00000583743 153 ntBASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 AC024243.1-201ENST00000609234 778 ntBASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF4Q9NR80 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARHGEF4Q9NR80 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARHGEF4Q9NR80 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ARHGEF4Q9NR80 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.27■□□□□ 0.67
ARHGEF4Q9NR80 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ARHGEF4Q9NR80 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ARHGEF4Q9NR80 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
ARHGEF4Q9NR80 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 MIR564-202ENST00000385049 94 ntBASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 KRT18P48-201ENST00000434763 852 ntBASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 HCG4P8-203ENST00000443049 980 ntBASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF4Q9NR80 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.25■□□□□ 0.67
ARHGEF4Q9NR80 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms