Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC52A3Q9NQ40 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 CD99P1-205ENST00000527459 561 ntBASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 FSCN1P1-201ENST00000568912 1481 ntBASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 LINC01126-201ENST00000623515 1646 ntBASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC52A3Q9NQ40 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 MIR4674-201ENST00000582457 87 ntBASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 AC006058.3-201ENST00000606217 1069 ntBASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC52A3Q9NQ40 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 MIR149-201ENST00000384879 89 ntBASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 AC009102.3-201ENST00000623118 1491 ntBASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC52A3Q9NQ40 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 AC099398.1-201ENST00000567919 2776 ntBASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC52A3Q9NQ40 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms