Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPPED1Q9BRF8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 RPPH1-201ENST00000516869 333 ntBASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 FZD10-202ENST00000539839 3282 ntBASIC17.31■□□□□ 0.36
CPPED1Q9BRF8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 SDHAP2-201ENST00000455183 2001 ntBASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPPED1Q9BRF8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 AC006116.8-202ENST00000587620 1550 ntBASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 FAM197Y1-201ENST00000421178 764 ntBASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 MFAP1P1-201ENST00000442257 1255 ntBASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 AC099343.3-201ENST00000605834 2503 ntBASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPPED1Q9BRF8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms