Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TIMP4Q99727 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.89■□□□□ 0.29
TIMP4Q99727 AC067852.2-201ENST00000590513 2313 ntBASIC16.89■□□□□ 0.29
TIMP4Q99727 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.89■□□□□ 0.29
TIMP4Q99727 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.89■□□□□ 0.29
TIMP4Q99727 KRT18P38-201ENST00000449496 1282 ntBASIC16.89■□□□□ 0.29
TIMP4Q99727 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.89■□□□□ 0.29
TIMP4Q99727 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.89■□□□□ 0.29
TIMP4Q99727 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.89■□□□□ 0.29
TIMP4Q99727 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TIMP4Q99727 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.89■□□□□ 0.29
TIMP4Q99727 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
TIMP4Q99727 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.89■□□□□ 0.29
TIMP4Q99727 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP4Q99727 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP4Q99727 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TIMP4Q99727 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.88■□□□□ 0.29
TIMP4Q99727 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 STARP1-201ENST00000397973 869 ntBASIC16.88■□□□□ 0.29
TIMP4Q99727 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP4Q99727 AL671277.2-201ENST00000458060 996 ntBASIC16.88■□□□□ 0.29
TIMP4Q99727 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.88■□□□□ 0.29
TIMP4Q99727 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.88■□□□□ 0.29
TIMP4Q99727 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP4Q99727 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.88■□□□□ 0.29
TIMP4Q99727 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP4Q99727 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.88■□□□□ 0.29
TIMP4Q99727 AL358472.4-201ENST00000633140 710 ntBASIC16.88■□□□□ 0.29
TIMP4Q99727 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
TIMP4Q99727 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TIMP4Q99727 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TIMP4Q99727 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP4Q99727 ABALON-201ENST00000629058 1903 ntBASIC16.88■□□□□ 0.29
TIMP4Q99727 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP4Q99727 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP4Q99727 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TIMP4Q99727 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.87■□□□□ 0.29
TIMP4Q99727 RCC2P3-201ENST00000418112 1537 ntBASIC16.87■□□□□ 0.29
TIMP4Q99727 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP4Q99727 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TIMP4Q99727 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.87■□□□□ 0.29
TIMP4Q99727 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
TIMP4Q99727 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP4Q99727 AC091076.1-201ENST00000610741 619 ntBASIC16.87■□□□□ 0.29
TIMP4Q99727 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.87■□□□□ 0.29
TIMP4Q99727 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 AL109659.2-201ENST00000606809 1674 ntBASIC16.87■□□□□ 0.29
TIMP4Q99727 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TIMP4Q99727 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TIMP4Q99727 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TIMP4Q99727 AC073592.3-201ENST00000625118 1834 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms