Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CFAP54Q96N23 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CFAP54Q96N23 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 AC007952.6-201ENST00000573168 2673 ntBASIC17.98■□□□□ 0.47
CFAP54Q96N23 AC003957.1-201ENST00000625108 2673 ntBASIC17.98■□□□□ 0.47
CFAP54Q96N23 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.98■□□□□ 0.47
CFAP54Q96N23 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CFAP54Q96N23 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 AL353692.3-201ENST00000407031 1396 ntBASIC17.97■□□□□ 0.47
CFAP54Q96N23 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.97■□□□□ 0.47
CFAP54Q96N23 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 AL359881.2-201ENST00000602973 570 ntBASIC17.97■□□□□ 0.47
CFAP54Q96N23 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 SDHAP1-207ENST00000440850 2000 ntBASIC17.97■□□□□ 0.47
CFAP54Q96N23 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 MKNK2P1-201ENST00000437526 628 ntBASIC17.97■□□□□ 0.47
CFAP54Q96N23 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 RN7SL204P-201ENST00000582831 262 ntBASIC17.97■□□□□ 0.47
CFAP54Q96N23 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.97■□□□□ 0.47
CFAP54Q96N23 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CFAP54Q96N23 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CFAP54Q96N23 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 TP73-AS1-210ENST00000637775 1455 ntBASIC17.96■□□□□ 0.47
CFAP54Q96N23 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CFAP54Q96N23 RCN1P2-201ENST00000398357 915 ntBASIC17.96■□□□□ 0.47
CFAP54Q96N23 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms