Protein–RNA interactions for Protein: Q8NI51

CTCFL, Transcriptional repressor CTCFL, humanhuman

Predicted RBP Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFLQ8NI51 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTCFLQ8NI51 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTCFLQ8NI51 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.44■■□□□ 1.02
CTCFLQ8NI51 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTCFLQ8NI51 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTCFLQ8NI51 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.44■■□□□ 1.02
CTCFLQ8NI51 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 PVRIG2P-201ENST00000435460 978 ntBASIC21.43■■□□□ 1.02
CTCFLQ8NI51 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.43■■□□□ 1.02
CTCFLQ8NI51 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 SDHAP2-201ENST00000455183 2001 ntBASIC21.43■■□□□ 1.02
CTCFLQ8NI51 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTCFLQ8NI51 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 AL671277.2-201ENST00000458060 996 ntBASIC21.42■■□□□ 1.02
CTCFLQ8NI51 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 AL136038.4-201ENST00000603606 1261 ntBASIC21.42■■□□□ 1.02
CTCFLQ8NI51 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.42■■□□□ 1.02
CTCFLQ8NI51 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 AC079602.3-201ENST00000623931 403 ntBASIC21.42■■□□□ 1.02
CTCFLQ8NI51 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.42■■□□□ 1.02
CTCFLQ8NI51 AC138932.1-201ENST00000534164 6830 ntBASIC21.41■■□□□ 1.02
CTCFLQ8NI51 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 AC092597.1-201ENST00000487352 616 ntBASIC21.41■■□□□ 1.02
CTCFLQ8NI51 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTCFLQ8NI51 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 LINC01311-201ENST00000565162 1445 ntBASIC21.4■■□□□ 1.02
CTCFLQ8NI51 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTCFLQ8NI51 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms