Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.11■□□□□ 0.65
SCML4Q8N228 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCML4Q8N228 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCML4Q8N228 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SCML4Q8N228 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SCML4Q8N228 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.1■□□□□ 0.65
SCML4Q8N228 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.1■□□□□ 0.65
SCML4Q8N228 AC005332.3-201ENST00000589904 676 ntBASIC19.1■□□□□ 0.65
SCML4Q8N228 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.1■□□□□ 0.65
SCML4Q8N228 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCML4Q8N228 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SCML4Q8N228 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.1■□□□□ 0.65
SCML4Q8N228 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SCML4Q8N228 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCML4Q8N228 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCML4Q8N228 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
SCML4Q8N228 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCML4Q8N228 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCML4Q8N228 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SCML4Q8N228 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCML4Q8N228 ESPNP-201ENST00000270691 2015 ntBASIC19.09■□□□□ 0.65
SCML4Q8N228 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SCML4Q8N228 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.09■□□□□ 0.65
SCML4Q8N228 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.09■□□□□ 0.65
SCML4Q8N228 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.09■□□□□ 0.65
SCML4Q8N228 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.09■□□□□ 0.65
SCML4Q8N228 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCML4Q8N228 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.09■□□□□ 0.65
SCML4Q8N228 AC090164.3-201ENST00000610780 2143 ntBASIC19.09■□□□□ 0.65
SCML4Q8N228 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.09■□□□□ 0.65
SCML4Q8N228 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCML4Q8N228 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SCML4Q8N228 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCML4Q8N228 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.08■□□□□ 0.65
SCML4Q8N228 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCML4Q8N228 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.08■□□□□ 0.64
SCML4Q8N228 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.08■□□□□ 0.64
SCML4Q8N228 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.08■□□□□ 0.64
SCML4Q8N228 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 KRT8P26-201ENST00000534154 1276 ntBASIC19.08■□□□□ 0.64
SCML4Q8N228 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.08■□□□□ 0.64
SCML4Q8N228 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.08■□□□□ 0.64
SCML4Q8N228 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SCML4Q8N228 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.08■□□□□ 0.64
SCML4Q8N228 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.08■□□□□ 0.64
SCML4Q8N228 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
SCML4Q8N228 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.08■□□□□ 0.64
SCML4Q8N228 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SCML4Q8N228 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.08■□□□□ 0.64
SCML4Q8N228 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.08■□□□□ 0.64
SCML4Q8N228 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCML4Q8N228 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.07■□□□□ 0.64
SCML4Q8N228 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SCML4Q8N228 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.07■□□□□ 0.64
SCML4Q8N228 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SCML4Q8N228 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.07■□□□□ 0.64
SCML4Q8N228 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.07■□□□□ 0.64
SCML4Q8N228 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SCML4Q8N228 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.07■□□□□ 0.64
SCML4Q8N228 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCML4Q8N228 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.07■□□□□ 0.64
SCML4Q8N228 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.07■□□□□ 0.64
SCML4Q8N228 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.07■□□□□ 0.64
SCML4Q8N228 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.07■□□□□ 0.64
SCML4Q8N228 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SCML4Q8N228 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms