Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 AC064836.3-201ENST00000607928 673 ntBASIC23.03■■□□□ 1.28
COL23A1Q86Y22 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.03■■□□□ 1.28
COL23A1Q86Y22 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 MCCD1P2-201ENST00000423228 335 ntBASIC23.02■■□□□ 1.28
COL23A1Q86Y22 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 AC005829.1-201ENST00000570002 483 ntBASIC23.02■■□□□ 1.28
COL23A1Q86Y22 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL23A1Q86Y22 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 FAM8A3P-201ENST00000427218 844 ntBASIC23.01■■□□□ 1.27
COL23A1Q86Y22 PON3-203ENST00000427422 894 ntTSL 3 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 YBX1P5-201ENST00000509441 847 ntBASIC23.01■■□□□ 1.27
COL23A1Q86Y22 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 AC092364.2-202ENST00000597012 1073 ntBASIC23.01■■□□□ 1.27
COL23A1Q86Y22 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 FP475955.4-201ENST00000623131 1990 ntBASIC23.01■■□□□ 1.27
COL23A1Q86Y22 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL23A1Q86Y22 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23■■□□□ 1.27
COL23A1Q86Y22 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23■■□□□ 1.27
COL23A1Q86Y22 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
COL23A1Q86Y22 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23■■□□□ 1.27
COL23A1Q86Y22 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL23A1Q86Y22 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
COL23A1Q86Y22 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23■■□□□ 1.27
COL23A1Q86Y22 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23■■□□□ 1.27
COL23A1Q86Y22 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23■■□□□ 1.27
COL23A1Q86Y22 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23■■□□□ 1.27
COL23A1Q86Y22 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23■■□□□ 1.27
COL23A1Q86Y22 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
COL23A1Q86Y22 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC23■■□□□ 1.27
COL23A1Q86Y22 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23■■□□□ 1.27
COL23A1Q86Y22 SNHG9-202ENST00000564014 471 ntBASIC23■■□□□ 1.27
COL23A1Q86Y22 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC23■■□□□ 1.27
COL23A1Q86Y22 AC009154.2-201ENST00000621177 724 ntBASIC23■■□□□ 1.27
COL23A1Q86Y22 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL23A1Q86Y22 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23■■□□□ 1.27
COL23A1Q86Y22 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23■■□□□ 1.27
COL23A1Q86Y22 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL23A1Q86Y22 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
COL23A1Q86Y22 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL23A1Q86Y22 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23■■□□□ 1.27
COL23A1Q86Y22 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL23A1Q86Y22 LAGE3P1-201ENST00000425356 484 ntBASIC22.99■■□□□ 1.27
COL23A1Q86Y22 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms