Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 AC023632.3-201ENST00000521633 145 ntBASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 PCDHA14-201ENST00000506751 2298 ntBASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00173Q6ZV60 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 AL356309.3-201ENST00000624132 1934 ntBASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 FLJ13224-201ENST00000313737 1514 ntBASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 AC142381.2-201ENST00000566120 298 ntBASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 CROCCP2-202ENST00000412962 2773 ntBASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00173Q6ZV60 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC00173Q6ZV60 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms