Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.51■■□□□ 1.03
CERKLQ49MI3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.51■■□□□ 1.03
CERKLQ49MI3 AC011840.4-201ENST00000578471 627 ntBASIC21.51■■□□□ 1.03
CERKLQ49MI3 LINC01711-201ENST00000598340 967 ntBASIC21.51■■□□□ 1.03
CERKLQ49MI3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CERKLQ49MI3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.51■■□□□ 1.03
CERKLQ49MI3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.5■■□□□ 1.03
CERKLQ49MI3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.5■■□□□ 1.03
CERKLQ49MI3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CERKLQ49MI3 NSUN5P1-202ENST00000421140 1535 ntBASIC21.5■■□□□ 1.03
CERKLQ49MI3 NSUN5P2-203ENST00000457352 1529 ntBASIC21.5■■□□□ 1.03
CERKLQ49MI3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 AL024508.2-201ENST00000607749 1894 ntBASIC21.49■■□□□ 1.03
CERKLQ49MI3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CERKLQ49MI3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CERKLQ49MI3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CERKLQ49MI3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
CERKLQ49MI3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.47■■□□□ 1.03
CERKLQ49MI3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.47■■□□□ 1.03
CERKLQ49MI3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CERKLQ49MI3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.47■■□□□ 1.03
CERKLQ49MI3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.47■■□□□ 1.03
CERKLQ49MI3 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.47■■□□□ 1.03
CERKLQ49MI3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.47■■□□□ 1.03
CERKLQ49MI3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CERKLQ49MI3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms