Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.24□□□□□ -0.77
SEC61GP60059 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SEC61GP60059 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC10.24□□□□□ -0.77
SEC61GP60059 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.24□□□□□ -0.77
SEC61GP60059 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 AC007225.1-201ENST00000566331 1836 ntBASIC10.24□□□□□ -0.77
SEC61GP60059 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SEC61GP60059 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
SEC61GP60059 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SEC61GP60059 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.24□□□□□ -0.77
SEC61GP60059 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.24□□□□□ -0.77
SEC61GP60059 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC10.24□□□□□ -0.77
SEC61GP60059 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC10.24□□□□□ -0.77
SEC61GP60059 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SEC61GP60059 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 AC099778.1-201ENST00000568593 1911 ntBASIC10.23□□□□□ -0.77
SEC61GP60059 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 AC121338.2-201ENST00000622535 1744 ntBASIC10.23□□□□□ -0.77
SEC61GP60059 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.23□□□□□ -0.77
SEC61GP60059 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC10.23□□□□□ -0.77
SEC61GP60059 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC10.23□□□□□ -0.77
SEC61GP60059 AC027020.2-201ENST00000602585 2389 ntBASIC10.23□□□□□ -0.77
SEC61GP60059 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.23□□□□□ -0.77
SEC61GP60059 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
SEC61GP60059 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SEC61GP60059 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms