Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXG1P55316 MIR662-201ENST00000384847 95 ntBASIC16.12■□□□□ 0.17
FOXG1P55316 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXG1P55316 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXG1P55316 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXG1P55316 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXG1P55316 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXG1P55316 RNF126P1-202ENST00000569893 925 ntBASIC16.12■□□□□ 0.17
FOXG1P55316 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXG1P55316 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
FOXG1P55316 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 AL162741.1-201ENST00000565563 1558 ntBASIC16.12■□□□□ 0.17
FOXG1P55316 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FOXG1P55316 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXG1P55316 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
FOXG1P55316 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXG1P55316 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXG1P55316 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXG1P55316 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXG1P55316 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FOXG1P55316 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXG1P55316 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FOXG1P55316 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 AL645929.1-201ENST00000420084 975 ntBASIC16.11■□□□□ 0.17
FOXG1P55316 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXG1P55316 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXG1P55316 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXG1P55316 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXG1P55316 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXG1P55316 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXG1P55316 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 AL024508.2-201ENST00000607749 1894 ntBASIC16.11■□□□□ 0.17
FOXG1P55316 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 LINC01126-201ENST00000623515 1646 ntBASIC16.11■□□□□ 0.17
FOXG1P55316 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 IER3-202ENST00000376377 1350 ntBASIC16.11■□□□□ 0.17
FOXG1P55316 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXG1P55316 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FOXG1P55316 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXG1P55316 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXG1P55316 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXG1P55316 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 AC009113.1-201ENST00000570267 2443 ntBASIC16.1■□□□□ 0.17
FOXG1P55316 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXG1P55316 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
FOXG1P55316 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXG1P55316 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXG1P55316 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXG1P55316 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXG1P55316 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXG1P55316 AC009065.1-201ENST00000564055 1225 ntBASIC16.1■□□□□ 0.17
FOXG1P55316 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXG1P55316 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXG1P55316 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 AP000550.4-202ENST00000639755 178 ntBASIC16.1■□□□□ 0.17
FOXG1P55316 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXG1P55316 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
FOXG1P55316 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms