Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CKS2P33552 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CKS2P33552 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 AC112777.1-201ENST00000540175 1423 ntBASIC13.56□□□□□ -0.24
CKS2P33552 AC010980.2-201ENST00000587099 1412 ntBASIC13.56□□□□□ -0.24
CKS2P33552 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CKS2P33552 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CKS2P33552 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CKS2P33552 KRT17P1-201ENST00000399211 1546 ntBASIC13.55□□□□□ -0.24
CKS2P33552 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CKS2P33552 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.55□□□□□ -0.24
CKS2P33552 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 KRT18P61-201ENST00000585825 1298 ntBASIC13.55□□□□□ -0.24
CKS2P33552 AC141586.5-201ENST00000624546 2050 ntBASIC13.55□□□□□ -0.24
CKS2P33552 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CKS2P33552 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CKS2P33552 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CKS2P33552 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.55□□□□□ -0.24
CKS2P33552 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 AC068587.6-202ENST00000641839 5619 ntBASIC13.55□□□□□ -0.24
CKS2P33552 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.55□□□□□ -0.24
CKS2P33552 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS2P33552 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CKS2P33552 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 FLJ13224-201ENST00000313737 1514 ntBASIC13.54□□□□□ -0.24
CKS2P33552 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.54□□□□□ -0.24
CKS2P33552 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 AC108860.2-201ENST00000562760 2183 ntBASIC13.54□□□□□ -0.24
CKS2P33552 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.54□□□□□ -0.24
CKS2P33552 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CKS2P33552 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CKS2P33552 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.54□□□□□ -0.24
CKS2P33552 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.54□□□□□ -0.24
CKS2P33552 LSM12P1-201ENST00000411836 588 ntBASIC13.54□□□□□ -0.24
CKS2P33552 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 CYP2T1P-201ENST00000432607 1285 ntBASIC13.54□□□□□ -0.24
CKS2P33552 TUBB8P6-201ENST00000436895 1288 ntBASIC13.54□□□□□ -0.24
CKS2P33552 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.54□□□□□ -0.24
CKS2P33552 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.54□□□□□ -0.24
CKS2P33552 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.54□□□□□ -0.24
CKS2P33552 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS2P33552 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms