Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GDF1P27539 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.7■□□□□ 0.26
GDF1P27539 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDF1P27539 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
GDF1P27539 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 MYLKP1-201ENST00000509077 1580 ntBASIC16.69■□□□□ 0.26
GDF1P27539 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GDF1P27539 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 MIR662-201ENST00000384847 95 ntBASIC16.69■□□□□ 0.26
GDF1P27539 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
GDF1P27539 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GDF1P27539 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GDF1P27539 BX276092.5-203ENST00000456199 560 ntBASIC16.69■□□□□ 0.26
GDF1P27539 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.69■□□□□ 0.26
GDF1P27539 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.69■□□□□ 0.26
GDF1P27539 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GDF1P27539 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.69■□□□□ 0.26
GDF1P27539 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GDF1P27539 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.69■□□□□ 0.26
GDF1P27539 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GDF1P27539 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.69■□□□□ 0.26
GDF1P27539 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.69■□□□□ 0.26
GDF1P27539 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.69■□□□□ 0.26
GDF1P27539 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GDF1P27539 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDF1P27539 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 AC093525.10-201ENST00000625130 1569 ntBASIC16.68■□□□□ 0.26
GDF1P27539 AC099343.3-201ENST00000605834 2503 ntBASIC16.68■□□□□ 0.26
GDF1P27539 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GDF1P27539 AL499627.1-201ENST00000569373 2188 ntBASIC16.68■□□□□ 0.26
GDF1P27539 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 MIR149-201ENST00000384879 89 ntBASIC16.68■□□□□ 0.26
GDF1P27539 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
GDF1P27539 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 KRT18P48-201ENST00000434763 852 ntBASIC16.68■□□□□ 0.26
GDF1P27539 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.68■□□□□ 0.26
GDF1P27539 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 AP003733.1-201ENST00000491725 852 ntBASIC16.68■□□□□ 0.26
GDF1P27539 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.68■□□□□ 0.26
GDF1P27539 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.68■□□□□ 0.26
GDF1P27539 AL121672.3-201ENST00000608644 468 ntBASIC16.68■□□□□ 0.26
GDF1P27539 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.68■□□□□ 0.26
GDF1P27539 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDF1P27539 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.68■□□□□ 0.26
GDF1P27539 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.68■□□□□ 0.26
GDF1P27539 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 ANO7L1-203ENST00000602586 1720 ntBASIC16.67■□□□□ 0.26
GDF1P27539 AC009102.3-201ENST00000623118 1491 ntBASIC16.67■□□□□ 0.26
GDF1P27539 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 AC090340.1-201ENST00000620778 4980 ntBASIC16.67■□□□□ 0.26
GDF1P27539 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.67■□□□□ 0.26
GDF1P27539 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.67■□□□□ 0.26
GDF1P27539 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 HCG4P8-203ENST00000443049 980 ntBASIC16.67■□□□□ 0.26
GDF1P27539 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
GDF1P27539 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.67■□□□□ 0.26
GDF1P27539 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.67■□□□□ 0.26
GDF1P27539 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.67■□□□□ 0.26
GDF1P27539 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.67■□□□□ 0.26
GDF1P27539 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GDF1P27539 AC024563.2-201ENST00000603282 481 ntBASIC16.67■□□□□ 0.26
GDF1P27539 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.67■□□□□ 0.26
GDF1P27539 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDF1P27539 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.66■□□□□ 0.26
GDF1P27539 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms