Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP24386 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.24■□□□□ 0.35
CHMP24386 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP24386 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP24386 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP24386 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP24386 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP24386 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP24386 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP24386 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP24386 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CHMP24386 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP24386 AC005363.2-201ENST00000618631 242 ntBASIC17.23■□□□□ 0.35
CHMP24386 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHMP24386 AC116562.4-202ENST00000641738 218 ntBASIC17.23■□□□□ 0.35
CHMP24386 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP24386 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CHMP24386 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP24386 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP24386 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.22■□□□□ 0.35
CHMP24386 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP24386 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CHMP24386 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP24386 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHMP24386 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CHMP24386 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.22■□□□□ 0.35
CHMP24386 TSPY23P-201ENST00000440136 739 ntBASIC17.22■□□□□ 0.35
CHMP24386 TSPY17P-201ENST00000450329 467 ntBASIC17.22■□□□□ 0.35
CHMP24386 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.22■□□□□ 0.35
CHMP24386 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.22■□□□□ 0.35
CHMP24386 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHMP24386 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.22■□□□□ 0.35
CHMP24386 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHMP24386 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP24386 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP24386 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP24386 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP24386 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHMP24386 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.21■□□□□ 0.35
CHMP24386 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.21■□□□□ 0.35
CHMP24386 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
CHMP24386 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHMP24386 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.21■□□□□ 0.35
CHMP24386 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHMP24386 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHMP24386 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP24386 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHMP24386 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.21■□□□□ 0.34
CHMP24386 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.21■□□□□ 0.34
CHMP24386 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP24386 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHMP24386 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHMP24386 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP24386 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.2■□□□□ 0.34
CHMP24386 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms