Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.96■□□□□ 0.63
BRAFP15056 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BRAFP15056 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BRAFP15056 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.96■□□□□ 0.63
BRAFP15056 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRAFP15056 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
BRAFP15056 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 RBM17P1-201ENST00000453646 1190 ntBASIC18.95■□□□□ 0.62
BRAFP15056 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.95■□□□□ 0.62
BRAFP15056 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.95■□□□□ 0.62
BRAFP15056 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.95■□□□□ 0.62
BRAFP15056 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.95■□□□□ 0.62
BRAFP15056 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.95■□□□□ 0.62
BRAFP15056 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.95■□□□□ 0.62
BRAFP15056 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.95■□□□□ 0.62
BRAFP15056 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.95■□□□□ 0.62
BRAFP15056 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRAFP15056 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.94■□□□□ 0.62
BRAFP15056 LINC00896-202ENST00000609602 2128 ntBASIC18.94■□□□□ 0.62
BRAFP15056 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
BRAFP15056 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 AC011506.1-201ENST00000474329 610 ntBASIC18.94■□□□□ 0.62
BRAFP15056 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.94■□□□□ 0.62
BRAFP15056 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.94■□□□□ 0.62
BRAFP15056 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.94■□□□□ 0.62
BRAFP15056 AC131212.4-201ENST00000623606 975 ntBASIC18.94■□□□□ 0.62
BRAFP15056 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 AC134043.2-201ENST00000624206 2238 ntBASIC18.94■□□□□ 0.62
BRAFP15056 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRAFP15056 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.94■□□□□ 0.62
BRAFP15056 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.93■□□□□ 0.62
BRAFP15056 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
BRAFP15056 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
BRAFP15056 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.93■□□□□ 0.62
BRAFP15056 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 B3GAT3P1-201ENST00000471720 806 ntBASIC18.93■□□□□ 0.62
BRAFP15056 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.93■□□□□ 0.62
BRAFP15056 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
BRAFP15056 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.93■□□□□ 0.62
BRAFP15056 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
BRAFP15056 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRAFP15056 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BRAFP15056 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BRAFP15056 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
BRAFP15056 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
BRAFP15056 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRAFP15056 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms