Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.35■□□□□ 0.69
RARAP10276 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.34■□□□□ 0.69
RARAP10276 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.34■□□□□ 0.69
RARAP10276 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.34■□□□□ 0.69
RARAP10276 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.34■□□□□ 0.69
RARAP10276 MIR3180-5-201ENST00000583743 153 ntBASIC19.34■□□□□ 0.69
RARAP10276 MYLKP1-201ENST00000509077 1580 ntBASIC19.34■□□□□ 0.69
RARAP10276 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.34■□□□□ 0.69
RARAP10276 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.34■□□□□ 0.69
RARAP10276 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 ESPNP-201ENST00000270691 2015 ntBASIC19.34■□□□□ 0.69
RARAP10276 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RARAP10276 KRT8P9-201ENST00000558927 1449 ntBASIC19.34■□□□□ 0.69
RARAP10276 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARAP10276 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARAP10276 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RARAP10276 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RARAP10276 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RARAP10276 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RARAP10276 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.33■□□□□ 0.68
RARAP10276 AL596275.1-201ENST00000423464 877 ntBASIC19.33■□□□□ 0.68
RARAP10276 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.33■□□□□ 0.68
RARAP10276 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RARAP10276 AC093827.2-201ENST00000512654 315 ntBASIC19.33■□□□□ 0.68
RARAP10276 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RARAP10276 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.33■□□□□ 0.68
RARAP10276 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.33■□□□□ 0.68
RARAP10276 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.33■□□□□ 0.68
RARAP10276 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RARAP10276 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.33■□□□□ 0.68
RARAP10276 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RARAP10276 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RARAP10276 AC034236.2-201ENST00000606662 1610 ntBASIC19.33■□□□□ 0.68
RARAP10276 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.32■□□□□ 0.68
RARAP10276 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RARAP10276 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 AC036111.1-201ENST00000533973 1582 ntBASIC19.32■□□□□ 0.68
RARAP10276 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.32■□□□□ 0.68
RARAP10276 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.32■□□□□ 0.68
RARAP10276 AC007663.1-201ENST00000438948 1240 ntBASIC19.32■□□□□ 0.68
RARAP10276 CCR12P-201ENST00000446203 998 ntBASIC19.32■□□□□ 0.68
RARAP10276 C2orf69P3-201ENST00000565542 1120 ntBASIC19.32■□□□□ 0.68
RARAP10276 AC066615.1-201ENST00000640911 628 ntBASIC19.32■□□□□ 0.68
RARAP10276 CYP2D8P-201ENST00000433633 1490 ntBASIC19.32■□□□□ 0.68
RARAP10276 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RARAP10276 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.32■□□□□ 0.68
RARAP10276 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RARAP10276 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RARAP10276 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.32■□□□□ 0.68
RARAP10276 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.32■□□□□ 0.68
RARAP10276 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RARAP10276 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.31■□□□□ 0.68
RARAP10276 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
RARAP10276 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.31■□□□□ 0.68
RARAP10276 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.31■□□□□ 0.68
RARAP10276 TSPY14P-201ENST00000303979 915 ntBASIC19.31■□□□□ 0.68
RARAP10276 INGX-201ENST00000359239 846 ntBASIC19.31■□□□□ 0.68
RARAP10276 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.31■□□□□ 0.68
RARAP10276 AC116562.4-202ENST00000641738 218 ntBASIC19.31■□□□□ 0.68
RARAP10276 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RARAP10276 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RARAP10276 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms