Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.72■□□□□ 0.27
FREM3P0C091 AL136038.4-201ENST00000603606 1261 ntBASIC16.72■□□□□ 0.27
FREM3P0C091 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.72■□□□□ 0.27
FREM3P0C091 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.72■□□□□ 0.27
FREM3P0C091 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.72■□□□□ 0.27
FREM3P0C091 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.72■□□□□ 0.27
FREM3P0C091 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
FREM3P0C091 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.72■□□□□ 0.27
FREM3P0C091 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.72■□□□□ 0.27
FREM3P0C091 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.72■□□□□ 0.27
FREM3P0C091 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
FREM3P0C091 AL136038.3-201ENST00000561909 1096 ntBASIC16.72■□□□□ 0.27
FREM3P0C091 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.72■□□□□ 0.27
FREM3P0C091 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FREM3P0C091 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.71■□□□□ 0.27
FREM3P0C091 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FREM3P0C091 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.71■□□□□ 0.27
FREM3P0C091 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FREM3P0C091 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 KRT18P48-201ENST00000434763 852 ntBASIC16.71■□□□□ 0.27
FREM3P0C091 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.71■□□□□ 0.27
FREM3P0C091 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FREM3P0C091 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FREM3P0C091 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.71■□□□□ 0.26
FREM3P0C091 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FREM3P0C091 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.7■□□□□ 0.26
FREM3P0C091 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
FREM3P0C091 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.7■□□□□ 0.26
FREM3P0C091 AC079602.3-201ENST00000623931 403 ntBASIC16.7■□□□□ 0.26
FREM3P0C091 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
FREM3P0C091 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.7■□□□□ 0.26
FREM3P0C091 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.7■□□□□ 0.26
FREM3P0C091 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.7■□□□□ 0.26
FREM3P0C091 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FREM3P0C091 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
FREM3P0C091 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.69■□□□□ 0.26
FREM3P0C091 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
FREM3P0C091 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
FREM3P0C091 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.69■□□□□ 0.26
FREM3P0C091 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
FREM3P0C091 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FREM3P0C091 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
FREM3P0C091 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FREM3P0C091 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.69■□□□□ 0.26
FREM3P0C091 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FREM3P0C091 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms