Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.53■□□□□ 0.56
MMP2P08253 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.53■□□□□ 0.56
MMP2P08253 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 DUX4L26-201ENST00000489078 1255 ntBASIC18.53■□□□□ 0.56
MMP2P08253 AC063952.2-201ENST00000498792 1227 ntBASIC18.53■□□□□ 0.56
MMP2P08253 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP2P08253 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP2P08253 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP2P08253 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP2P08253 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP2P08253 PHGDH-209ENST00000641074 1780 ntBASIC18.53■□□□□ 0.56
MMP2P08253 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP2P08253 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
MMP2P08253 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP2P08253 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP2P08253 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.52■□□□□ 0.56
MMP2P08253 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.52■□□□□ 0.56
MMP2P08253 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP2P08253 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MMP2P08253 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 FAM210CP-201ENST00000445714 574 ntBASIC18.52■□□□□ 0.56
MMP2P08253 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 AC092597.1-201ENST00000487352 616 ntBASIC18.52■□□□□ 0.56
MMP2P08253 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.52■□□□□ 0.56
MMP2P08253 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.52■□□□□ 0.56
MMP2P08253 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MMP2P08253 HYMAI.1-201ENST00000620949 238 ntBASIC18.52■□□□□ 0.56
MMP2P08253 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.52■□□□□ 0.56
MMP2P08253 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
MMP2P08253 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.52■□□□□ 0.56
MMP2P08253 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP2P08253 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.52■□□□□ 0.55
MMP2P08253 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MMP2P08253 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MMP2P08253 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.52■□□□□ 0.55
MMP2P08253 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.52■□□□□ 0.55
MMP2P08253 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP2P08253 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP2P08253 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
MMP2P08253 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP2P08253 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP2P08253 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MMP2P08253 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP2P08253 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP2P08253 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 ABALON-201ENST00000629058 1903 ntBASIC18.51■□□□□ 0.55
MMP2P08253 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MMP2P08253 AL359075.1-203ENST00000462729 1002 ntBASIC18.51■□□□□ 0.55
MMP2P08253 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.51■□□□□ 0.55
MMP2P08253 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MMP2P08253 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
MMP2P08253 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.51■□□□□ 0.55
MMP2P08253 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP2P08253 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MMP2P08253 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MMP2P08253 AL391807.1-203ENST00000604392 2365 ntBASIC18.5■□□□□ 0.55
MMP2P08253 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP2P08253 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP2P08253 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.5■□□□□ 0.55
MMP2P08253 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.5■□□□□ 0.55
MMP2P08253 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP2P08253 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP2P08253 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP2P08253 AL390961.4-201ENST00000623958 2535 ntBASIC18.5■□□□□ 0.55
MMP2P08253 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP2P08253 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.5■□□□□ 0.55
MMP2P08253 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MMP2P08253 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
MMP2P08253 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
MMP2P08253 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MMP2P08253 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MMP2P08253 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms