Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 TMEM191A-211ENST00000637163 1067 ntBASIC16.58■□□□□ 0.24
HLA-DPB1P04440 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DPB1P04440 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.56■□□□□ 0.24
HLA-DPB1P04440 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 GCSHP5-201ENST00000443090 522 ntBASIC16.56■□□□□ 0.24
HLA-DPB1P04440 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DPB1P04440 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms