Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV12-3P01733 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV12-3P01733 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV12-3P01733 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV12-3P01733 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV12-3P01733 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV12-3P01733 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV12-3P01733 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRBV12-3P01733 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV12-3P01733 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV12-3P01733 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV12-3P01733 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 AC073592.3-201ENST00000625118 1834 ntBASIC14.23□□□□□ -0.13
TRBV12-3P01733 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.23□□□□□ -0.13
TRBV12-3P01733 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 MIR3917-201ENST00000580971 93 ntBASIC14.23□□□□□ -0.13
TRBV12-3P01733 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV12-3P01733 AC090164.3-201ENST00000610780 2143 ntBASIC14.23□□□□□ -0.13
TRBV12-3P01733 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV12-3P01733 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 AC092647.4-201ENST00000457211 535 ntBASIC14.22□□□□□ -0.13
TRBV12-3P01733 RASA4DP-201ENST00000460726 1199 ntBASIC14.22□□□□□ -0.13
TRBV12-3P01733 AC063952.2-201ENST00000498792 1227 ntBASIC14.22□□□□□ -0.13
TRBV12-3P01733 AC022616.7-201ENST00000525383 220 ntBASIC14.22□□□□□ -0.13
TRBV12-3P01733 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV12-3P01733 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV12-3P01733 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms