Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TIMP1P01033 AC009102.3-201ENST00000623118 1491 ntBASIC19.86■□□□□ 0.77
TIMP1P01033 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.85■□□□□ 0.77
TIMP1P01033 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.85■□□□□ 0.77
TIMP1P01033 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TIMP1P01033 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP1P01033 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.85■□□□□ 0.77
TIMP1P01033 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP1P01033 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.85■□□□□ 0.77
TIMP1P01033 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.85■□□□□ 0.77
TIMP1P01033 AC007967.2-201ENST00000432613 625 ntBASIC19.85■□□□□ 0.77
TIMP1P01033 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP1P01033 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.85■□□□□ 0.77
TIMP1P01033 NKAPP1-205ENST00000585790 367 ntBASIC19.85■□□□□ 0.77
TIMP1P01033 MTDHP5-201ENST00000598980 586 ntBASIC19.85■□□□□ 0.77
TIMP1P01033 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.85■□□□□ 0.77
TIMP1P01033 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.85■□□□□ 0.77
TIMP1P01033 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP1P01033 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP1P01033 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.85■□□□□ 0.77
TIMP1P01033 AP002414.3-201ENST00000589352 1468 ntBASIC19.85■□□□□ 0.77
TIMP1P01033 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.85■□□□□ 0.77
TIMP1P01033 LINC01006-201ENST00000333319 2292 ntBASIC19.85■□□□□ 0.77
TIMP1P01033 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TIMP1P01033 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TIMP1P01033 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP1P01033 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TIMP1P01033 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP1P01033 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP1P01033 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.84■□□□□ 0.77
TIMP1P01033 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
TIMP1P01033 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP1P01033 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP1P01033 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP1P01033 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.84■□□□□ 0.77
TIMP1P01033 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP1P01033 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TIMP1P01033 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
TIMP1P01033 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.83■□□□□ 0.77
TIMP1P01033 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.83■□□□□ 0.77
TIMP1P01033 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.83■□□□□ 0.77
TIMP1P01033 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.83■□□□□ 0.77
TIMP1P01033 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.83■□□□□ 0.77
TIMP1P01033 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.83■□□□□ 0.77
TIMP1P01033 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.83■□□□□ 0.77
TIMP1P01033 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP1P01033 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.83■□□□□ 0.76
TIMP1P01033 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.83■□□□□ 0.76
TIMP1P01033 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMP1P01033 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.83■□□□□ 0.76
TIMP1P01033 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMP1P01033 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.82■□□□□ 0.76
TIMP1P01033 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.82■□□□□ 0.76
TIMP1P01033 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMP1P01033 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMP1P01033 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMP1P01033 AC211486.1-202ENST00000416371 468 ntBASIC19.82■□□□□ 0.76
TIMP1P01033 AC023274.1-201ENST00000418278 595 ntBASIC19.82■□□□□ 0.76
TIMP1P01033 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMP1P01033 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.82■□□□□ 0.76
TIMP1P01033 AC211476.1-201ENST00000503899 468 ntBASIC19.82■□□□□ 0.76
TIMP1P01033 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP1P01033 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMP1P01033 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMP1P01033 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms