Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.33■□□□□ 0.53
PRAMEF1O95521 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PRAMEF1O95521 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF1O95521 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF1O95521 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF1O95521 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.33■□□□□ 0.53
PRAMEF1O95521 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 AC034232.1-201ENST00000506026 1064 ntBASIC18.33■□□□□ 0.52
PRAMEF1O95521 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 MIR3917-201ENST00000580971 93 ntBASIC18.33■□□□□ 0.52
PRAMEF1O95521 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF1O95521 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEF1O95521 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 SDHAP2-201ENST00000455183 2001 ntBASIC18.32■□□□□ 0.52
PRAMEF1O95521 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 AK4P3-201ENST00000418260 669 ntBASIC18.32■□□□□ 0.52
PRAMEF1O95521 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 AC138932.1-201ENST00000534164 6830 ntBASIC18.32■□□□□ 0.52
PRAMEF1O95521 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.32■□□□□ 0.52
PRAMEF1O95521 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF1O95521 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 RNF152P1-201ENST00000397754 604 ntBASIC18.31■□□□□ 0.52
PRAMEF1O95521 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 AL157888.1-201ENST00000631930 593 ntBASIC18.31■□□□□ 0.52
PRAMEF1O95521 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF1O95521 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF1O95521 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEF1O95521 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF1O95521 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF1O95521 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF1O95521 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF1O95521 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF1O95521 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF1O95521 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms