Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA3O95167 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA3O95167 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA3O95167 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.73□□□□□ -0.05
NDUFA3O95167 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
NDUFA3O95167 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA3O95167 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA3O95167 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.73□□□□□ -0.05
NDUFA3O95167 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA3O95167 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA3O95167 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.73□□□□□ -0.05
NDUFA3O95167 AL162741.1-201ENST00000565563 1558 ntBASIC14.73□□□□□ -0.05
NDUFA3O95167 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.73□□□□□ -0.05
NDUFA3O95167 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.72□□□□□ -0.05
NDUFA3O95167 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 LIN28AP1-201ENST00000429574 405 ntBASIC14.72□□□□□ -0.05
NDUFA3O95167 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
NDUFA3O95167 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 SEC1P-202ENST00000473944 940 ntBASIC14.72□□□□□ -0.05
NDUFA3O95167 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA3O95167 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA3O95167 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NDUFA3O95167 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.71□□□□□ -0.05
NDUFA3O95167 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NDUFA3O95167 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.71□□□□□ -0.05
NDUFA3O95167 AC009102.3-201ENST00000623118 1491 ntBASIC14.71□□□□□ -0.05
NDUFA3O95167 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NDUFA3O95167 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.71□□□□□ -0.05
NDUFA3O95167 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.71□□□□□ -0.05
NDUFA3O95167 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 AC211429.1-201ENST00000415277 523 ntBASIC14.71□□□□□ -0.05
NDUFA3O95167 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.71□□□□□ -0.05
NDUFA3O95167 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
NDUFA3O95167 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.71□□□□□ -0.05
NDUFA3O95167 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.71□□□□□ -0.05
NDUFA3O95167 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 AC010203.1-204ENST00000548782 407 ntBASIC14.71□□□□□ -0.05
NDUFA3O95167 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.71□□□□□ -0.05
NDUFA3O95167 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.71□□□□□ -0.05
NDUFA3O95167 AC010240.3-201ENST00000607688 395 ntBASIC14.71□□□□□ -0.05
NDUFA3O95167 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.71□□□□□ -0.05
NDUFA3O95167 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA3O95167 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.71□□□□□ -0.06
NDUFA3O95167 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 AC104581.1-202ENST00000635932 2618 ntBASIC14.71□□□□□ -0.06
NDUFA3O95167 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.71□□□□□ -0.06
NDUFA3O95167 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.71□□□□□ -0.06
NDUFA3O95167 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
NDUFA3O95167 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.71□□□□□ -0.06
NDUFA3O95167 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA3O95167 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms