Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
BRD4O60885 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.42■■□□□ 1.66
BRD4O60885 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC25.42■■□□□ 1.66
BRD4O60885 AP000867.3-201ENST00000524675 377 ntBASIC25.42■■□□□ 1.66
BRD4O60885 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.42■■□□□ 1.66
BRD4O60885 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC25.42■■□□□ 1.66
BRD4O60885 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
BRD4O60885 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
BRD4O60885 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC25.41■■□□□ 1.66
BRD4O60885 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 WIZP1-201ENST00000531444 2299 ntBASIC25.41■■□□□ 1.66
BRD4O60885 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 USP49-202ENST00000373010 2446 ntTSL 5 BASIC25.41■■□□□ 1.66
BRD4O60885 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC25.41■■□□□ 1.66
BRD4O60885 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 PBK-203ENST00000522944 1499 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 IGHGP-201ENST00000390555 1178 ntBASIC25.41■■□□□ 1.66
BRD4O60885 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 EMBP1-201ENST00000458200 901 ntBASIC25.41■■□□□ 1.66
BRD4O60885 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 PNN-202ENST00000553331 656 ntTSL 3 BASIC25.41■■□□□ 1.66
BRD4O60885 AL160237.2-201ENST00000556165 472 ntBASIC25.41■■□□□ 1.66
BRD4O60885 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC25.41■■□□□ 1.66
BRD4O60885 AC091304.2-201ENST00000564639 760 ntBASIC25.41■■□□□ 1.66
BRD4O60885 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.41■■□□□ 1.66
BRD4O60885 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
BRD4O60885 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC25.4■■□□□ 1.66
BRD4O60885 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC25.4■■□□□ 1.66
BRD4O60885 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.4■■□□□ 1.66
BRD4O60885 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.4■■□□□ 1.66
BRD4O60885 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.4■■□□□ 1.66
BRD4O60885 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
BRD4O60885 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC25.4■■□□□ 1.66
BRD4O60885 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC25.4■■□□□ 1.66
BRD4O60885 AC104819.1-201ENST00000504587 486 ntBASIC25.4■■□□□ 1.66
BRD4O60885 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC25.4■■□□□ 1.66
BRD4O60885 AC009065.1-201ENST00000564055 1225 ntBASIC25.4■■□□□ 1.66
BRD4O60885 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC25.4■■□□□ 1.66
BRD4O60885 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
BRD4O60885 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
BRD4O60885 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
BRD4O60885 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
BRD4O60885 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
BRD4O60885 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
BRD4O60885 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
BRD4O60885 AC233702.3-201ENST00000578656 1387 ntBASIC25.39■■□□□ 1.66
BRD4O60885 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
BRD4O60885 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
BRD4O60885 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.39■■□□□ 1.65
BRD4O60885 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
BRD4O60885 BMF-207ENST00000559701 630 ntTSL 3 BASIC25.39■■□□□ 1.65
BRD4O60885 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC25.39■■□□□ 1.65
BRD4O60885 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC25.39■■□□□ 1.65
BRD4O60885 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC25.39■■□□□ 1.65
BRD4O60885 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC25.39■■□□□ 1.65
BRD4O60885 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
BRD4O60885 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC25.38■■□□□ 1.65
BRD4O60885 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
BRD4O60885 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC25.38■■□□□ 1.65
BRD4O60885 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
BRD4O60885 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
BRD4O60885 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC25.38■■□□□ 1.65
BRD4O60885 NAT14-202ENST00000587400 416 ntTSL 5 BASIC25.38■■□□□ 1.65
BRD4O60885 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
BRD4O60885 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
BRD4O60885 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
BRD4O60885 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
BRD4O60885 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms