Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.23■□□□□ 0.35
HCN1O60741 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 ARMC10P1-201ENST00000313754 855 ntBASIC17.23■□□□□ 0.35
HCN1O60741 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.23■□□□□ 0.35
HCN1O60741 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.23■□□□□ 0.35
HCN1O60741 LINC01238-205ENST00000567549 1107 ntBASIC17.23■□□□□ 0.35
HCN1O60741 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 AC104581.1-202ENST00000635932 2618 ntBASIC17.23■□□□□ 0.35
HCN1O60741 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.23■□□□□ 0.35
HCN1O60741 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 AC018470.1-201ENST00000624790 3129 ntBASIC17.23■□□□□ 0.35
HCN1O60741 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.23■□□□□ 0.35
HCN1O60741 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCN1O60741 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.22■□□□□ 0.35
HCN1O60741 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.22■□□□□ 0.35
HCN1O60741 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.22■□□□□ 0.35
HCN1O60741 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 AC006011.2-201ENST00000621313 1158 ntBASIC17.22■□□□□ 0.35
HCN1O60741 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.22■□□□□ 0.35
HCN1O60741 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
HCN1O60741 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
HCN1O60741 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HCN1O60741 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCN1O60741 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.22■□□□□ 0.35
HCN1O60741 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HCN1O60741 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HCN1O60741 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HCN1O60741 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HCN1O60741 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
HCN1O60741 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HCN1O60741 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.21■□□□□ 0.35
HCN1O60741 AK4P3-201ENST00000418260 669 ntBASIC17.21■□□□□ 0.35
HCN1O60741 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.21■□□□□ 0.35
HCN1O60741 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
HCN1O60741 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
HCN1O60741 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.21■□□□□ 0.35
HCN1O60741 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
HCN1O60741 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCN1O60741 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HCN1O60741 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HCN1O60741 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HCN1O60741 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HCN1O60741 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
HCN1O60741 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HCN1O60741 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.2■□□□□ 0.34
HCN1O60741 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HCN1O60741 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.2■□□□□ 0.34
HCN1O60741 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCN1O60741 NOC2LP2-201ENST00000407594 1944 ntBASIC17.2■□□□□ 0.34
HCN1O60741 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HCN1O60741 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms