Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDH7O60245 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH7O60245 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH7O60245 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDH7O60245 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH7O60245 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH7O60245 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDH7O60245 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDH7O60245 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH7O60245 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH7O60245 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH7O60245 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDH7O60245 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH7O60245 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH7O60245 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH7O60245 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 ESPNP-201ENST00000270691 2015 ntBASIC17.6■□□□□ 0.41
PCDH7O60245 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDH7O60245 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH7O60245 LETM1P2-201ENST00000597330 2178 ntBASIC17.6■□□□□ 0.41
PCDH7O60245 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH7O60245 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH7O60245 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDH7O60245 AC093677.2-201ENST00000600169 1863 ntBASIC17.59■□□□□ 0.41
PCDH7O60245 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 KRT18P23-201ENST00000435622 1283 ntBASIC17.59■□□□□ 0.41
PCDH7O60245 AC007663.1-201ENST00000438948 1240 ntBASIC17.59■□□□□ 0.41
PCDH7O60245 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDH7O60245 WWOX-216ENST00000569818 525 ntBASIC17.59■□□□□ 0.41
PCDH7O60245 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH7O60245 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH7O60245 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH7O60245 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PCDH7O60245 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH7O60245 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH7O60245 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH7O60245 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH7O60245 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH7O60245 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH7O60245 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDH7O60245 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDH7O60245 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH7O60245 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.58■□□□□ 0.41
PCDH7O60245 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH7O60245 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH7O60245 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
PCDH7O60245 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH7O60245 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PCDH7O60245 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH7O60245 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PCDH7O60245 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH7O60245 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDH7O60245 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDH7O60245 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 AC099343.3-201ENST00000605834 2503 ntBASIC17.58■□□□□ 0.4
PCDH7O60245 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCDH7O60245 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH7O60245 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms