Protein–RNA interactions for Protein: O43246

SLC7A4, Cationic amino acid transporter 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC7A4O43246 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC7A4O43246 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC7A4O43246 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC7A4O43246 MIR564-202ENST00000385049 94 ntBASIC18.71■□□□□ 0.59
SLC7A4O43246 AL645929.1-201ENST00000420084 975 ntBASIC18.71■□□□□ 0.59
SLC7A4O43246 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC7A4O43246 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC7A4O43246 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC7A4O43246 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC7A4O43246 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
SLC7A4O43246 NEFHP1-201ENST00000412845 2629 ntBASIC18.7■□□□□ 0.58
SLC7A4O43246 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.7■□□□□ 0.58
SLC7A4O43246 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SLC7A4O43246 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 KRT18P23-201ENST00000435622 1283 ntBASIC18.7■□□□□ 0.58
SLC7A4O43246 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 AC092597.1-201ENST00000487352 616 ntBASIC18.7■□□□□ 0.58
SLC7A4O43246 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC7A4O43246 AC112777.1-201ENST00000540175 1423 ntBASIC18.7■□□□□ 0.58
SLC7A4O43246 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC7A4O43246 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC7A4O43246 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SLC7A4O43246 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC7A4O43246 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC7A4O43246 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC7A4O43246 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC7A4O43246 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC7A4O43246 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC7A4O43246 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC7A4O43246 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SLC7A4O43246 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.69■□□□□ 0.58
SLC7A4O43246 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC7A4O43246 AC126763.1-201ENST00000552015 2118 ntBASIC18.69■□□□□ 0.58
SLC7A4O43246 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.69■□□□□ 0.58
SLC7A4O43246 AC104390.1-201ENST00000555663 520 ntBASIC18.69■□□□□ 0.58
SLC7A4O43246 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
SLC7A4O43246 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC7A4O43246 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC7A4O43246 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC7A4O43246 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC7A4O43246 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SLC7A4O43246 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SLC7A4O43246 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC7A4O43246 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC7A4O43246 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC7A4O43246 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC7A4O43246 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC7A4O43246 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC7A4O43246 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms