Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KPNA4O00629 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
KPNA4O00629 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KPNA4O00629 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KPNA4O00629 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KPNA4O00629 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KPNA4O00629 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
KPNA4O00629 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
KPNA4O00629 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
KPNA4O00629 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.23■□□□□ 0.35
KPNA4O00629 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 AC128676.1-201ENST00000454392 318 ntBASIC17.23■□□□□ 0.35
KPNA4O00629 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 C1QBPP2-201ENST00000528754 825 ntBASIC17.23■□□□□ 0.35
KPNA4O00629 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.23■□□□□ 0.35
KPNA4O00629 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.23■□□□□ 0.35
KPNA4O00629 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.23■□□□□ 0.35
KPNA4O00629 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.23■□□□□ 0.35
KPNA4O00629 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KPNA4O00629 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.23■□□□□ 0.35
KPNA4O00629 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
KPNA4O00629 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KPNA4O00629 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.22■□□□□ 0.35
KPNA4O00629 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.22■□□□□ 0.35
KPNA4O00629 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KPNA4O00629 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KPNA4O00629 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 AP002982.1-201ENST00000492365 877 ntBASIC17.22■□□□□ 0.35
KPNA4O00629 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.22■□□□□ 0.35
KPNA4O00629 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.22■□□□□ 0.35
KPNA4O00629 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.22■□□□□ 0.35
KPNA4O00629 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.22■□□□□ 0.35
KPNA4O00629 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
KPNA4O00629 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.22■□□□□ 0.35
KPNA4O00629 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.22■□□□□ 0.35
KPNA4O00629 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KPNA4O00629 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.22■□□□□ 0.35
KPNA4O00629 HTR7P1-201ENST00000538670 1336 ntBASIC17.21■□□□□ 0.35
KPNA4O00629 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.21■□□□□ 0.35
KPNA4O00629 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KPNA4O00629 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KPNA4O00629 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.21■□□□□ 0.35
KPNA4O00629 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.21■□□□□ 0.35
KPNA4O00629 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KPNA4O00629 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.21■□□□□ 0.35
KPNA4O00629 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KPNA4O00629 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.21■□□□□ 0.35
KPNA4O00629 FER1L4-210ENST00000615531 5998 ntBASIC17.21■□□□□ 0.35
KPNA4O00629 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.21■□□□□ 0.35
KPNA4O00629 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.21■□□□□ 0.35
KPNA4O00629 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KPNA4O00629 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.21■□□□□ 0.35
KPNA4O00629 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms