Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 TNXA-203ENST00000507684 2038 ntBASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 KRT126P-201ENST00000549467 1181 ntBASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPA3F8WFD2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPA3F8WFD2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 KRT8P32-201ENST00000512863 1461 ntBASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 MIR3917-201ENST00000580971 93 ntBASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 AC079602.3-201ENST00000623931 403 ntBASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA3F8WFD2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA3F8WFD2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NPIPA3F8WFD2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA3F8WFD2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA3F8WFD2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA3F8WFD2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA3F8WFD2 HEIH-201ENST00000623091 1652 ntBASIC16.75■□□□□ 0.27
NPIPA3F8WFD2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms