Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VGLL3A8MV65 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.07■□□□□ 0.48
VGLL3A8MV65 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VGLL3A8MV65 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VGLL3A8MV65 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VGLL3A8MV65 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VGLL3A8MV65 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.07■□□□□ 0.48
VGLL3A8MV65 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VGLL3A8MV65 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.07■□□□□ 0.48
VGLL3A8MV65 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 FP325331.1-202ENST00000623531 1380 ntBASIC18.06■□□□□ 0.48
VGLL3A8MV65 AL512353.2-201ENST00000448759 1962 ntBASIC18.06■□□□□ 0.48
VGLL3A8MV65 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 AC011298.3-201ENST00000615796 283 ntBASIC18.06■□□□□ 0.48
VGLL3A8MV65 AC009086.3-201ENST00000623486 1008 ntBASIC18.06■□□□□ 0.48
VGLL3A8MV65 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
VGLL3A8MV65 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VGLL3A8MV65 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 AC019069.1-201ENST00000610008 1333 ntBASIC18.05■□□□□ 0.48
VGLL3A8MV65 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 EDA-201ENST00000338901 1233 ntBASIC18.05■□□□□ 0.48
VGLL3A8MV65 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 SERBP1P1-201ENST00000396021 1160 ntBASIC18.05■□□□□ 0.48
VGLL3A8MV65 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VGLL3A8MV65 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VGLL3A8MV65 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.04■□□□□ 0.48
VGLL3A8MV65 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.04■□□□□ 0.48
VGLL3A8MV65 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.04■□□□□ 0.48
VGLL3A8MV65 AC104640.1-201ENST00000562617 2109 ntBASIC18.04■□□□□ 0.48
VGLL3A8MV65 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.04■□□□□ 0.48
VGLL3A8MV65 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
VGLL3A8MV65 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VGLL3A8MV65 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.04■□□□□ 0.48
VGLL3A8MV65 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.04■□□□□ 0.48
VGLL3A8MV65 AC024257.2-201ENST00000549699 147 ntBASIC18.04■□□□□ 0.48
VGLL3A8MV65 AC005837.3-201ENST00000612163 286 ntBASIC18.04■□□□□ 0.48
VGLL3A8MV65 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms