Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 HLA-A-209ENST00000638375 975 ntBASIC19.95■□□□□ 0.78
CCDC66A2RUB6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.95■□□□□ 0.78
CCDC66A2RUB6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 LINC00896-202ENST00000609602 2128 ntBASIC19.94■□□□□ 0.78
CCDC66A2RUB6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 ABALON-201ENST00000629058 1903 ntBASIC19.94■□□□□ 0.78
CCDC66A2RUB6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 ANO7L1-203ENST00000602586 1720 ntBASIC19.94■□□□□ 0.78
CCDC66A2RUB6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 LINC01126-201ENST00000623515 1646 ntBASIC19.94■□□□□ 0.78
CCDC66A2RUB6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CCDC66A2RUB6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 ESPNP-201ENST00000270691 2015 ntBASIC19.93■□□□□ 0.78
CCDC66A2RUB6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 CROCCP1-201ENST00000426910 5675 ntBASIC19.93■□□□□ 0.78
CCDC66A2RUB6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 AC004264.1-201ENST00000608354 794 ntBASIC19.93■□□□□ 0.78
CCDC66A2RUB6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC66A2RUB6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 TSPY23P-201ENST00000440136 739 ntBASIC19.92■□□□□ 0.78
CCDC66A2RUB6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC66A2RUB6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms