Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 MIR3180-4-201ENST00000582223 153 ntBASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 AC024243.1-201ENST00000609234 778 ntBASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 AL023973.1-201ENST00000624619 620 ntBASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFSF12-TNFSF13A0A0A6YY99 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AL163051.1-201ENST00000569214 1512 ntBASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC092647.4-201ENST00000457211 535 ntBASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SEC1P-202ENST00000473944 940 ntBASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC140113.3-201ENST00000605663 199 ntBASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC090164.3-201ENST00000610780 2143 ntBASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AC009065.1-201ENST00000564055 1225 ntBASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFSF12-TNFSF13A0A0A6YY99 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms