Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHB7Q9Y5E2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDHB7Q9Y5E2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB7Q9Y5E2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDHB7Q9Y5E2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDHB7Q9Y5E2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB7Q9Y5E2 AL139393.2-201ENST00000608721 2025 ntBASIC27.17■■□□□ 1.94
PCDHB7Q9Y5E2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHB7Q9Y5E2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHB7Q9Y5E2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHB7Q9Y5E2 ABCB10P3-201ENST00000561950 2166 ntBASIC27.15■■□□□ 1.94
PCDHB7Q9Y5E2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHB7Q9Y5E2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDHB7Q9Y5E2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHB7Q9Y5E2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHB7Q9Y5E2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHB7Q9Y5E2 DUX4L18-201ENST00000553347 1267 ntBASIC27.13■■□□□ 1.93
PCDHB7Q9Y5E2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
PCDHB7Q9Y5E2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDHB7Q9Y5E2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
PCDHB7Q9Y5E2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
PCDHB7Q9Y5E2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.12■■□□□ 1.93
PCDHB7Q9Y5E2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHB7Q9Y5E2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHB7Q9Y5E2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 RARRES2P1-201ENST00000474487 481 ntBASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 AC025884.2-201ENST00000553429 711 ntBASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 AC026202.3-201ENST00000600805 1127 ntBASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHB7Q9Y5E2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHB7Q9Y5E2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHB7Q9Y5E2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHB7Q9Y5E2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHB7Q9Y5E2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.09■■□□□ 1.93
PCDHB7Q9Y5E2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHB7Q9Y5E2 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.09■■□□□ 1.93
PCDHB7Q9Y5E2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PCDHB7Q9Y5E2 RP9P-202ENST00000450133 1212 ntBASIC27.08■■□□□ 1.93
PCDHB7Q9Y5E2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDHB7Q9Y5E2 AP002414.2-202ENST00000590929 1450 ntBASIC27.07■■□□□ 1.92
PCDHB7Q9Y5E2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHB7Q9Y5E2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHB7Q9Y5E2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHB7Q9Y5E2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.07■■□□□ 1.92
PCDHB7Q9Y5E2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHB7Q9Y5E2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.06■■□□□ 1.92
PCDHB7Q9Y5E2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHB7Q9Y5E2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHB7Q9Y5E2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHB7Q9Y5E2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
PCDHB7Q9Y5E2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHB7Q9Y5E2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
PCDHB7Q9Y5E2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHB7Q9Y5E2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHB7Q9Y5E2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PCDHB7Q9Y5E2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
PCDHB7Q9Y5E2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PCDHB7Q9Y5E2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PCDHB7Q9Y5E2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHB7Q9Y5E2 AC093536.1-201ENST00000569153 554 ntBASIC27.02■■□□□ 1.92
PCDHB7Q9Y5E2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHB7Q9Y5E2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.01■■□□□ 1.91
PCDHB7Q9Y5E2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.01■■□□□ 1.91
PCDHB7Q9Y5E2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHB7Q9Y5E2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
PCDHB7Q9Y5E2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27■■□□□ 1.91
PCDHB7Q9Y5E2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHB7Q9Y5E2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27■■□□□ 1.91
PCDHB7Q9Y5E2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
PCDHB7Q9Y5E2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHB7Q9Y5E2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.98■■□□□ 1.91
PCDHB7Q9Y5E2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHB7Q9Y5E2 MIR3960-201ENST00000583311 91 ntBASIC26.98■■□□□ 1.91
PCDHB7Q9Y5E2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.98■■□□□ 1.91
PCDHB7Q9Y5E2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHB7Q9Y5E2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHB7Q9Y5E2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHB7Q9Y5E2 DUX4L9-201ENST00000449051 1259 ntBASIC26.96■■□□□ 1.91
PCDHB7Q9Y5E2 RAP2CP1-202ENST00000605179 643 ntBASIC26.96■■□□□ 1.91
PCDHB7Q9Y5E2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
PCDHB7Q9Y5E2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.91
PCDHB7Q9Y5E2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHB7Q9Y5E2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHB7Q9Y5E2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHB7Q9Y5E2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.94■■□□□ 1.9
PCDHB7Q9Y5E2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
PCDHB7Q9Y5E2 BHLHE23-202ENST00000612929 1109 ntBASIC26.94■■□□□ 1.9
PCDHB7Q9Y5E2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms