Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC42SE2Q9NRR3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 MIR3665-201ENST00000578708 105 ntBASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 AP004609.3-201ENST00000610705 1884 ntBASIC17.1■□□□□ 0.33
CDC42SE2Q9NRR3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42SE2Q9NRR3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42SE2Q9NRR3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC42SE2Q9NRR3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42SE2Q9NRR3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC42SE2Q9NRR3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC42SE2Q9NRR3 AC092803.2-201ENST00000564287 1899 ntBASIC17.07■□□□□ 0.32
CDC42SE2Q9NRR3 DUSP8P4-201ENST00000399538 1761 ntBASIC17.07■□□□□ 0.32
CDC42SE2Q9NRR3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42SE2Q9NRR3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDC42SE2Q9NRR3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 AC020928.2-201ENST00000588717 2197 ntBASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42SE2Q9NRR3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDC42SE2Q9NRR3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42SE2Q9NRR3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42SE2Q9NRR3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CDC42SE2Q9NRR3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42SE2Q9NRR3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42SE2Q9NRR3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42SE2Q9NRR3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDC42SE2Q9NRR3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42SE2Q9NRR3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDC42SE2Q9NRR3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDC42SE2Q9NRR3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42SE2Q9NRR3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42SE2Q9NRR3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42SE2Q9NRR3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42SE2Q9NRR3 AC110285.7-201ENST00000624417 1536 ntBASIC17.02■□□□□ 0.32
CDC42SE2Q9NRR3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.02■□□□□ 0.32
CDC42SE2Q9NRR3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42SE2Q9NRR3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42SE2Q9NRR3 AP006261.1-201ENST00000584783 668 ntBASIC17.02■□□□□ 0.32
CDC42SE2Q9NRR3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDC42SE2Q9NRR3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDC42SE2Q9NRR3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42SE2Q9NRR3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42SE2Q9NRR3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.01■□□□□ 0.31
CDC42SE2Q9NRR3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDC42SE2Q9NRR3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 AC142472.1-201ENST00000612013 1741 ntBASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDC42SE2Q9NRR3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.99■□□□□ 0.31
CDC42SE2Q9NRR3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42SE2Q9NRR3 WHAMMP3-201ENST00000611636 1609 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms