Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TLR9Q9NR96 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.79■■□□□ 1.88
TLR9Q9NR96 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
TLR9Q9NR96 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TLR9Q9NR96 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TLR9Q9NR96 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
TLR9Q9NR96 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
TLR9Q9NR96 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.78■■□□□ 1.88
TLR9Q9NR96 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
TLR9Q9NR96 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.78■■□□□ 1.88
TLR9Q9NR96 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.77■■□□□ 1.88
TLR9Q9NR96 AC100797.4-201ENST00000631653 1827 ntBASIC26.77■■□□□ 1.88
TLR9Q9NR96 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.77■■□□□ 1.88
TLR9Q9NR96 AC026202.3-201ENST00000600805 1127 ntBASIC26.77■■□□□ 1.88
TLR9Q9NR96 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TLR9Q9NR96 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TLR9Q9NR96 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TLR9Q9NR96 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TLR9Q9NR96 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
TLR9Q9NR96 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TLR9Q9NR96 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TLR9Q9NR96 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
TLR9Q9NR96 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.75■■□□□ 1.87
TLR9Q9NR96 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
TLR9Q9NR96 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TLR9Q9NR96 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TLR9Q9NR96 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
TLR9Q9NR96 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.74■■□□□ 1.87
TLR9Q9NR96 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.74■■□□□ 1.87
TLR9Q9NR96 AC025884.2-201ENST00000553429 711 ntBASIC26.73■■□□□ 1.87
TLR9Q9NR96 AL035685.1-201ENST00000636663 812 ntBASIC26.73■■□□□ 1.87
TLR9Q9NR96 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TLR9Q9NR96 ST7-AS1-201ENST00000456775 1889 ntBASIC26.72■■□□□ 1.87
TLR9Q9NR96 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.72■■□□□ 1.87
TLR9Q9NR96 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.71■■□□□ 1.87
TLR9Q9NR96 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.71■■□□□ 1.87
TLR9Q9NR96 AL451085.2-201ENST00000605085 799 ntBASIC26.71■■□□□ 1.87
TLR9Q9NR96 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.71■■□□□ 1.87
TLR9Q9NR96 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TLR9Q9NR96 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.71■■□□□ 1.87
TLR9Q9NR96 RP9P-202ENST00000450133 1212 ntBASIC26.7■■□□□ 1.86
TLR9Q9NR96 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TLR9Q9NR96 DUX4L9-201ENST00000449051 1259 ntBASIC26.69■■□□□ 1.86
TLR9Q9NR96 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TLR9Q9NR96 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.69■■□□□ 1.86
TLR9Q9NR96 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
TLR9Q9NR96 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
TLR9Q9NR96 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TLR9Q9NR96 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TLR9Q9NR96 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.67■■□□□ 1.86
TLR9Q9NR96 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.67■■□□□ 1.86
TLR9Q9NR96 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TLR9Q9NR96 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
TLR9Q9NR96 AC093536.1-201ENST00000569153 554 ntBASIC26.66■■□□□ 1.86
TLR9Q9NR96 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
TLR9Q9NR96 BHLHE23-202ENST00000612929 1109 ntBASIC26.66■■□□□ 1.86
TLR9Q9NR96 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TLR9Q9NR96 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.65■■□□□ 1.86
TLR9Q9NR96 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TLR9Q9NR96 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TLR9Q9NR96 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.64■■□□□ 1.86
TLR9Q9NR96 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.64■■□□□ 1.86
TLR9Q9NR96 RAP2CP1-202ENST00000605179 643 ntBASIC26.64■■□□□ 1.86
TLR9Q9NR96 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TLR9Q9NR96 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
TLR9Q9NR96 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.64■■□□□ 1.85
TLR9Q9NR96 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TLR9Q9NR96 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.63■■□□□ 1.85
TLR9Q9NR96 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TLR9Q9NR96 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.63■■□□□ 1.85
TLR9Q9NR96 AC019069.1-201ENST00000610008 1333 ntBASIC26.63■■□□□ 1.85
TLR9Q9NR96 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.62■■□□□ 1.85
TLR9Q9NR96 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.62■■□□□ 1.85
TLR9Q9NR96 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TLR9Q9NR96 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TLR9Q9NR96 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
TLR9Q9NR96 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.62■■□□□ 1.85
TLR9Q9NR96 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
TLR9Q9NR96 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TLR9Q9NR96 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
TLR9Q9NR96 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.61■■□□□ 1.85
TLR9Q9NR96 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
TLR9Q9NR96 AC010980.1-201ENST00000587192 1142 ntBASIC26.6■■□□□ 1.85
TLR9Q9NR96 AC074183.2-201ENST00000623112 922 ntBASIC26.6■■□□□ 1.85
TLR9Q9NR96 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TLR9Q9NR96 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
TLR9Q9NR96 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TLR9Q9NR96 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TLR9Q9NR96 SPCS2P3-201ENST00000500401 656 ntBASIC26.59■■□□□ 1.85
TLR9Q9NR96 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.59■■□□□ 1.85
TLR9Q9NR96 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.58■■□□□ 1.85
TLR9Q9NR96 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TLR9Q9NR96 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
TLR9Q9NR96 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.58■■□□□ 1.85
TLR9Q9NR96 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TLR9Q9NR96 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.58■■□□□ 1.85
TLR9Q9NR96 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
TLR9Q9NR96 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.57■■□□□ 1.84
TLR9Q9NR96 MIR3960-201ENST00000583311 91 ntBASIC26.57■■□□□ 1.84
TLR9Q9NR96 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms