Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
DDX4Q9NQI0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX4Q9NQI0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.87■■■□□ 2.37
DDX4Q9NQI0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
DDX4Q9NQI0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.87■■■□□ 2.37
DDX4Q9NQI0 AC007029.1-201ENST00000604183 313 ntBASIC29.87■■■□□ 2.37
DDX4Q9NQI0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
DDX4Q9NQI0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 AC004987.1-201ENST00000428627 508 ntBASIC29.86■■■□□ 2.37
DDX4Q9NQI0 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.86■■■□□ 2.37
DDX4Q9NQI0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DDX4Q9NQI0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.85■■■□□ 2.37
DDX4Q9NQI0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DDX4Q9NQI0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DDX4Q9NQI0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.84■■■□□ 2.37
DDX4Q9NQI0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX4Q9NQI0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
DDX4Q9NQI0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.83■■■□□ 2.37
DDX4Q9NQI0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
DDX4Q9NQI0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
DDX4Q9NQI0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
DDX4Q9NQI0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.82■■■□□ 2.36
DDX4Q9NQI0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
DDX4Q9NQI0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX4Q9NQI0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX4Q9NQI0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX4Q9NQI0 ATP5G2P3-201ENST00000429083 425 ntBASIC29.81■■■□□ 2.36
DDX4Q9NQI0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX4Q9NQI0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
DDX4Q9NQI0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.8■■■□□ 2.36
DDX4Q9NQI0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
DDX4Q9NQI0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.8■■■□□ 2.36
DDX4Q9NQI0 AC009831.1-201ENST00000580420 1582 ntBASIC29.8■■■□□ 2.36
DDX4Q9NQI0 SMPD5-203ENST00000639008 1464 ntBASIC29.8■■■□□ 2.36
DDX4Q9NQI0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.8■■■□□ 2.36
DDX4Q9NQI0 TSPY13P-201ENST00000338964 914 ntBASIC29.79■■■□□ 2.36
DDX4Q9NQI0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.79■■■□□ 2.36
DDX4Q9NQI0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
DDX4Q9NQI0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
DDX4Q9NQI0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
DDX4Q9NQI0 AC025884.2-201ENST00000553429 711 ntBASIC29.78■■■□□ 2.36
DDX4Q9NQI0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
DDX4Q9NQI0 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.77■■■□□ 2.36
DDX4Q9NQI0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
DDX4Q9NQI0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
DDX4Q9NQI0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
DDX4Q9NQI0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
DDX4Q9NQI0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
DDX4Q9NQI0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
DDX4Q9NQI0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
DDX4Q9NQI0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
DDX4Q9NQI0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.76■■■□□ 2.35
DDX4Q9NQI0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX4Q9NQI0 AL592293.1-201ENST00000502889 1188 ntBASIC29.75■■■□□ 2.35
DDX4Q9NQI0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.75■■■□□ 2.35
DDX4Q9NQI0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.75■■■□□ 2.35
DDX4Q9NQI0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
DDX4Q9NQI0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
DDX4Q9NQI0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX4Q9NQI0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.74■■■□□ 2.35
DDX4Q9NQI0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
DDX4Q9NQI0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
DDX4Q9NQI0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
DDX4Q9NQI0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.73■■■□□ 2.35
DDX4Q9NQI0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
DDX4Q9NQI0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.73■■■□□ 2.35
DDX4Q9NQI0 AC133552.2-201ENST00000619106 1032 ntBASIC29.73■■■□□ 2.35
DDX4Q9NQI0 AC129492.7-201ENST00000622992 756 ntBASIC29.73■■■□□ 2.35
DDX4Q9NQI0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
DDX4Q9NQI0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
DDX4Q9NQI0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.72■■■□□ 2.35
DDX4Q9NQI0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
DDX4Q9NQI0 AC026202.3-201ENST00000600805 1127 ntBASIC29.72■■■□□ 2.35
DDX4Q9NQI0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
DDX4Q9NQI0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.71■■■□□ 2.35
DDX4Q9NQI0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
DDX4Q9NQI0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
DDX4Q9NQI0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
DDX4Q9NQI0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.69■■■□□ 2.34
DDX4Q9NQI0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
DDX4Q9NQI0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
DDX4Q9NQI0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
DDX4Q9NQI0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
DDX4Q9NQI0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
DDX4Q9NQI0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
DDX4Q9NQI0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
DDX4Q9NQI0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
DDX4Q9NQI0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.66■■■□□ 2.34
DDX4Q9NQI0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.66■■■□□ 2.34
DDX4Q9NQI0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
DDX4Q9NQI0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
DDX4Q9NQI0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
DDX4Q9NQI0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms