Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
C12orf4Q9NQ89 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
C12orf4Q9NQ89 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
C12orf4Q9NQ89 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.32■■□□□ 1
C12orf4Q9NQ89 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.32■■□□□ 1
C12orf4Q9NQ89 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.32■■□□□ 1
C12orf4Q9NQ89 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.31■■□□□ 1
C12orf4Q9NQ89 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf4Q9NQ89 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf4Q9NQ89 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.31■■□□□ 1
C12orf4Q9NQ89 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
C12orf4Q9NQ89 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.31■■□□□ 1
C12orf4Q9NQ89 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.31■■□□□ 1
C12orf4Q9NQ89 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.3■■□□□ 1
C12orf4Q9NQ89 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C12orf4Q9NQ89 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.3■■□□□ 1
C12orf4Q9NQ89 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.3■■□□□ 1
C12orf4Q9NQ89 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C12orf4Q9NQ89 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
C12orf4Q9NQ89 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.29■■□□□ 1
C12orf4Q9NQ89 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.29■■□□□ 1
C12orf4Q9NQ89 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.29■■□□□ 1
C12orf4Q9NQ89 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.29■■□□□ 1
C12orf4Q9NQ89 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.28■■□□□ 1
C12orf4Q9NQ89 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C12orf4Q9NQ89 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
C12orf4Q9NQ89 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.27■□□□□ 0.99
C12orf4Q9NQ89 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
C12orf4Q9NQ89 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
C12orf4Q9NQ89 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 AC005559.1-201ENST00000589661 871 ntBASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C12orf4Q9NQ89 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.25■□□□□ 0.99
C12orf4Q9NQ89 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.25■□□□□ 0.99
C12orf4Q9NQ89 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf4Q9NQ89 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf4Q9NQ89 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.25■□□□□ 0.99
C12orf4Q9NQ89 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
C12orf4Q9NQ89 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
C12orf4Q9NQ89 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
C12orf4Q9NQ89 AC135983.2-203ENST00000454486 1613 ntBASIC21.24■□□□□ 0.99
C12orf4Q9NQ89 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C12orf4Q9NQ89 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
C12orf4Q9NQ89 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
C12orf4Q9NQ89 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
C12orf4Q9NQ89 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C12orf4Q9NQ89 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
C12orf4Q9NQ89 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.23■□□□□ 0.99
C12orf4Q9NQ89 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf4Q9NQ89 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf4Q9NQ89 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.22■□□□□ 0.99
C12orf4Q9NQ89 AC018358.1-201ENST00000631079 1402 ntBASIC21.22■□□□□ 0.99
C12orf4Q9NQ89 AC108673.1-201ENST00000510422 1159 ntBASIC21.22■□□□□ 0.99
C12orf4Q9NQ89 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf4Q9NQ89 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf4Q9NQ89 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf4Q9NQ89 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf4Q9NQ89 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf4Q9NQ89 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf4Q9NQ89 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
C12orf4Q9NQ89 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf4Q9NQ89 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
C12orf4Q9NQ89 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
C12orf4Q9NQ89 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C12orf4Q9NQ89 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
C12orf4Q9NQ89 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.19■□□□□ 0.98
C12orf4Q9NQ89 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.19■□□□□ 0.98
C12orf4Q9NQ89 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 AL449106.1-201ENST00000608517 1980 ntBASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C12orf4Q9NQ89 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C12orf4Q9NQ89 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.17■□□□□ 0.98
C12orf4Q9NQ89 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
C12orf4Q9NQ89 WHAMMP2-203ENST00000563942 1603 ntBASIC21.17■□□□□ 0.98
C12orf4Q9NQ89 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C12orf4Q9NQ89 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C12orf4Q9NQ89 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C12orf4Q9NQ89 AC093323.1-202ENST00000635031 2045 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms