Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LRRC4CQ9HCJ2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.54■■□□□ 1.68
LRRC4CQ9HCJ2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.54■■□□□ 1.68
LRRC4CQ9HCJ2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
LRRC4CQ9HCJ2 AC145676.1-201ENST00000514988 2004 ntBASIC25.53■■□□□ 1.68
LRRC4CQ9HCJ2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LRRC4CQ9HCJ2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.52■■□□□ 1.68
LRRC4CQ9HCJ2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
LRRC4CQ9HCJ2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
LRRC4CQ9HCJ2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
LRRC4CQ9HCJ2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC4CQ9HCJ2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.5■■□□□ 1.67
LRRC4CQ9HCJ2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.5■■□□□ 1.67
LRRC4CQ9HCJ2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
LRRC4CQ9HCJ2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRRC4CQ9HCJ2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRRC4CQ9HCJ2 AC005559.1-201ENST00000589661 871 ntBASIC25.49■■□□□ 1.67
LRRC4CQ9HCJ2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
LRRC4CQ9HCJ2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
LRRC4CQ9HCJ2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.48■■□□□ 1.67
LRRC4CQ9HCJ2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.48■■□□□ 1.67
LRRC4CQ9HCJ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
LRRC4CQ9HCJ2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
LRRC4CQ9HCJ2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LRRC4CQ9HCJ2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.47■■□□□ 1.67
LRRC4CQ9HCJ2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LRRC4CQ9HCJ2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.46■■□□□ 1.67
LRRC4CQ9HCJ2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
LRRC4CQ9HCJ2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRRC4CQ9HCJ2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
LRRC4CQ9HCJ2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
LRRC4CQ9HCJ2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.45■■□□□ 1.66
LRRC4CQ9HCJ2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.45■■□□□ 1.66
LRRC4CQ9HCJ2 MIR6090-201ENST00000622481 60 ntBASIC25.45■■□□□ 1.66
LRRC4CQ9HCJ2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRRC4CQ9HCJ2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.44■■□□□ 1.66
LRRC4CQ9HCJ2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRRC4CQ9HCJ2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.44■■□□□ 1.66
LRRC4CQ9HCJ2 AC108673.1-201ENST00000510422 1159 ntBASIC25.44■■□□□ 1.66
LRRC4CQ9HCJ2 LINC00273-201ENST00000539813 1452 ntBASIC25.44■■□□□ 1.66
LRRC4CQ9HCJ2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
LRRC4CQ9HCJ2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC4CQ9HCJ2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
LRRC4CQ9HCJ2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC4CQ9HCJ2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.43■■□□□ 1.66
LRRC4CQ9HCJ2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC4CQ9HCJ2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.43■■□□□ 1.66
LRRC4CQ9HCJ2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC4CQ9HCJ2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC4CQ9HCJ2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.42■■□□□ 1.66
LRRC4CQ9HCJ2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC4CQ9HCJ2 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.42■■□□□ 1.66
LRRC4CQ9HCJ2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC4CQ9HCJ2 AC093323.1-202ENST00000635031 2045 ntBASIC25.42■■□□□ 1.66
LRRC4CQ9HCJ2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
LRRC4CQ9HCJ2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC4CQ9HCJ2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC4CQ9HCJ2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
LRRC4CQ9HCJ2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC4CQ9HCJ2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC4CQ9HCJ2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LRRC4CQ9HCJ2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRC4CQ9HCJ2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRC4CQ9HCJ2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
LRRC4CQ9HCJ2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.38■■□□□ 1.65
LRRC4CQ9HCJ2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRRC4CQ9HCJ2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.38■■□□□ 1.65
LRRC4CQ9HCJ2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRRC4CQ9HCJ2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LRRC4CQ9HCJ2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
LRRC4CQ9HCJ2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
LRRC4CQ9HCJ2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LRRC4CQ9HCJ2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.37■■□□□ 1.65
LRRC4CQ9HCJ2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.37■■□□□ 1.65
LRRC4CQ9HCJ2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
LRRC4CQ9HCJ2 DUSP8P4-201ENST00000399538 1761 ntBASIC25.36■■□□□ 1.65
LRRC4CQ9HCJ2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRC4CQ9HCJ2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.36■■□□□ 1.65
LRRC4CQ9HCJ2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.36■■□□□ 1.65
LRRC4CQ9HCJ2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRC4CQ9HCJ2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRC4CQ9HCJ2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRC4CQ9HCJ2 AC092803.2-201ENST00000564287 1899 ntBASIC25.34■■□□□ 1.65
LRRC4CQ9HCJ2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.34■■□□□ 1.65
LRRC4CQ9HCJ2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LRRC4CQ9HCJ2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
LRRC4CQ9HCJ2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC4CQ9HCJ2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRC4CQ9HCJ2 MIR3665-201ENST00000578708 105 ntBASIC25.32■■□□□ 1.64
LRRC4CQ9HCJ2 DUX4L28-201ENST00000623687 678 ntBASIC25.32■■□□□ 1.64
LRRC4CQ9HCJ2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.32■■□□□ 1.64
LRRC4CQ9HCJ2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms