Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.09■■□□□ 1.77
RNF38Q9H0F5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
RNF38Q9H0F5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF38Q9H0F5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF38Q9H0F5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF38Q9H0F5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF38Q9H0F5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF38Q9H0F5 NTF6A-201ENST00000591175 560 ntBASIC26.07■■□□□ 1.76
RNF38Q9H0F5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF38Q9H0F5 AL359258.2-201ENST00000564063 1566 ntBASIC26.07■■□□□ 1.76
RNF38Q9H0F5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF38Q9H0F5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.06■■□□□ 1.76
RNF38Q9H0F5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RNF38Q9H0F5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF38Q9H0F5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF38Q9H0F5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.04■■□□□ 1.76
RNF38Q9H0F5 U85056.1-201ENST00000616429 682 ntBASIC26.04■■□□□ 1.76
RNF38Q9H0F5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.04■■□□□ 1.76
RNF38Q9H0F5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.04■■□□□ 1.76
RNF38Q9H0F5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF38Q9H0F5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.03■■□□□ 1.76
RNF38Q9H0F5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF38Q9H0F5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF38Q9H0F5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.03■■□□□ 1.76
RNF38Q9H0F5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF38Q9H0F5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RNF38Q9H0F5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.02■■□□□ 1.76
RNF38Q9H0F5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RNF38Q9H0F5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.02■■□□□ 1.76
RNF38Q9H0F5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.02■■□□□ 1.76
RNF38Q9H0F5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF38Q9H0F5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.01■■□□□ 1.75
RNF38Q9H0F5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26■■□□□ 1.75
RNF38Q9H0F5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RNF38Q9H0F5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
RNF38Q9H0F5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF38Q9H0F5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RNF38Q9H0F5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF38Q9H0F5 AC018358.1-201ENST00000631079 1402 ntBASIC25.99■■□□□ 1.75
RNF38Q9H0F5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.99■■□□□ 1.75
RNF38Q9H0F5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RNF38Q9H0F5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF38Q9H0F5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
RNF38Q9H0F5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF38Q9H0F5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF38Q9H0F5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF38Q9H0F5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RNF38Q9H0F5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF38Q9H0F5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF38Q9H0F5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF38Q9H0F5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF38Q9H0F5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.96■■□□□ 1.75
RNF38Q9H0F5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF38Q9H0F5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
RNF38Q9H0F5 DRD5P2-201ENST00000421395 2012 ntBASIC25.95■■□□□ 1.75
RNF38Q9H0F5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
RNF38Q9H0F5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF38Q9H0F5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF38Q9H0F5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
RNF38Q9H0F5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF38Q9H0F5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF38Q9H0F5 SMPD5-203ENST00000639008 1464 ntBASIC25.92■■□□□ 1.74
RNF38Q9H0F5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF38Q9H0F5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
RNF38Q9H0F5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RNF38Q9H0F5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.91■■□□□ 1.74
RNF38Q9H0F5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RNF38Q9H0F5 AC012354.3-201ENST00000623734 483 ntBASIC25.91■■□□□ 1.74
RNF38Q9H0F5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RNF38Q9H0F5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF38Q9H0F5 AC007029.1-201ENST00000604183 313 ntBASIC25.9■■□□□ 1.74
RNF38Q9H0F5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF38Q9H0F5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.9■■□□□ 1.74
RNF38Q9H0F5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.9■■□□□ 1.74
RNF38Q9H0F5 KRT18P60-201ENST00000312876 1297 ntBASIC25.89■■□□□ 1.74
RNF38Q9H0F5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RNF38Q9H0F5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.88■■□□□ 1.73
RNF38Q9H0F5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.88■■□□□ 1.73
RNF38Q9H0F5 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.88■■□□□ 1.73
RNF38Q9H0F5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF38Q9H0F5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.87■■□□□ 1.73
RNF38Q9H0F5 AC025884.2-201ENST00000553429 711 ntBASIC25.87■■□□□ 1.73
RNF38Q9H0F5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF38Q9H0F5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF38Q9H0F5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RNF38Q9H0F5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RNF38Q9H0F5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
RNF38Q9H0F5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RNF38Q9H0F5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms