Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KRTAP3-1Q9BYR8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KRTAP3-1Q9BYR8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-1Q9BYR8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-1Q9BYR8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
KRTAP3-1Q9BYR8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-1Q9BYR8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-1Q9BYR8 AP004609.3-201ENST00000610705 1884 ntBASIC12.65□□□□□ -0.38
KRTAP3-1Q9BYR8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KRTAP3-1Q9BYR8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
KRTAP3-1Q9BYR8 AC093323.1-202ENST00000635031 2045 ntBASIC12.64□□□□□ -0.39
KRTAP3-1Q9BYR8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-1Q9BYR8 CHML-205ENST00000638160 705 ntTSL 3 BASIC12.64□□□□□ -0.39
KRTAP3-1Q9BYR8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-1Q9BYR8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
KRTAP3-1Q9BYR8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
KRTAP3-1Q9BYR8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KRTAP3-1Q9BYR8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-1Q9BYR8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP3-1Q9BYR8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-1Q9BYR8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP3-1Q9BYR8 LINC00273-201ENST00000539813 1452 ntBASIC12.63□□□□□ -0.39
KRTAP3-1Q9BYR8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC12.63□□□□□ -0.39
KRTAP3-1Q9BYR8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 MIR6090-201ENST00000622481 60 ntBASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-1Q9BYR8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-1Q9BYR8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC12.6□□□□□ -0.39
KRTAP3-1Q9BYR8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC12.6□□□□□ -0.39
KRTAP3-1Q9BYR8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
KRTAP3-1Q9BYR8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-1Q9BYR8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-1Q9BYR8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-1Q9BYR8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP3-1Q9BYR8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
KRTAP3-1Q9BYR8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
KRTAP3-1Q9BYR8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
KRTAP3-1Q9BYR8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KRTAP3-1Q9BYR8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
KRTAP3-1Q9BYR8 AC108673.1-201ENST00000510422 1159 ntBASIC12.58□□□□□ -0.4
KRTAP3-1Q9BYR8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC12.58□□□□□ -0.4
KRTAP3-1Q9BYR8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC12.58□□□□□ -0.4
KRTAP3-1Q9BYR8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC12.57□□□□□ -0.4
KRTAP3-1Q9BYR8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KRTAP3-1Q9BYR8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC12.56□□□□□ -0.4
KRTAP3-1Q9BYR8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
KRTAP3-1Q9BYR8 AC005559.1-201ENST00000589661 871 ntBASIC12.56□□□□□ -0.4
KRTAP3-1Q9BYR8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KRTAP3-1Q9BYR8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KRTAP3-1Q9BYR8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
KRTAP3-1Q9BYR8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP3-1Q9BYR8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms