Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MUC4Q99102 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MUC4Q99102 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MUC4Q99102 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MUC4Q99102 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MUC4Q99102 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MUC4Q99102 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.15■□□□□ 0.5
MUC4Q99102 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MUC4Q99102 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.15■□□□□ 0.5
MUC4Q99102 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.15■□□□□ 0.5
MUC4Q99102 AC135731.1-201ENST00000569415 2548 ntBASIC18.15■□□□□ 0.5
MUC4Q99102 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.14■□□□□ 0.49
MUC4Q99102 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MUC4Q99102 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.14■□□□□ 0.49
MUC4Q99102 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MUC4Q99102 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MUC4Q99102 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MUC4Q99102 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.14■□□□□ 0.49
MUC4Q99102 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MUC4Q99102 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MUC4Q99102 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
MUC4Q99102 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MUC4Q99102 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MUC4Q99102 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MUC4Q99102 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MUC4Q99102 AL449106.1-201ENST00000608517 1980 ntBASIC18.13■□□□□ 0.49
MUC4Q99102 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MUC4Q99102 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MUC4Q99102 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.12■□□□□ 0.49
MUC4Q99102 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MUC4Q99102 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
MUC4Q99102 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MUC4Q99102 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.11■□□□□ 0.49
MUC4Q99102 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MUC4Q99102 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MUC4Q99102 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MUC4Q99102 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MUC4Q99102 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
MUC4Q99102 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MUC4Q99102 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MUC4Q99102 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.1■□□□□ 0.49
MUC4Q99102 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MUC4Q99102 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MUC4Q99102 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MUC4Q99102 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MUC4Q99102 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MUC4Q99102 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MUC4Q99102 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.09■□□□□ 0.49
MUC4Q99102 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MUC4Q99102 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MUC4Q99102 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.09■□□□□ 0.49
MUC4Q99102 AC091060.1-201ENST00000623524 1766 ntBASIC18.09■□□□□ 0.49
MUC4Q99102 DUX4L29-201ENST00000425409 679 ntBASIC18.08■□□□□ 0.49
MUC4Q99102 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.08■□□□□ 0.49
MUC4Q99102 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.08■□□□□ 0.49
MUC4Q99102 AC021231.2-201ENST00000594613 730 ntBASIC18.08■□□□□ 0.49
MUC4Q99102 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.08■□□□□ 0.48
MUC4Q99102 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MUC4Q99102 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.08■□□□□ 0.48
MUC4Q99102 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.07■□□□□ 0.48
MUC4Q99102 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.07■□□□□ 0.48
MUC4Q99102 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MUC4Q99102 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MUC4Q99102 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MUC4Q99102 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MUC4Q99102 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.07■□□□□ 0.48
MUC4Q99102 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MUC4Q99102 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MUC4Q99102 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.06■□□□□ 0.48
MUC4Q99102 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MUC4Q99102 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.06■□□□□ 0.48
MUC4Q99102 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.06■□□□□ 0.48
MUC4Q99102 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.06■□□□□ 0.48
MUC4Q99102 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.06■□□□□ 0.48
MUC4Q99102 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.06■□□□□ 0.48
MUC4Q99102 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MUC4Q99102 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.05■□□□□ 0.48
MUC4Q99102 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MUC4Q99102 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.05■□□□□ 0.48
MUC4Q99102 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MUC4Q99102 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MUC4Q99102 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.05■□□□□ 0.48
MUC4Q99102 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MUC4Q99102 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MUC4Q99102 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.04■□□□□ 0.48
MUC4Q99102 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.04■□□□□ 0.48
MUC4Q99102 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.04■□□□□ 0.48
MUC4Q99102 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
MUC4Q99102 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MUC4Q99102 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MUC4Q99102 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.03■□□□□ 0.48
MUC4Q99102 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MUC4Q99102 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MUC4Q99102 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
MUC4Q99102 HSD17B1P1-201ENST00000590052 955 ntBASIC18.02■□□□□ 0.48
MUC4Q99102 AC020928.2-201ENST00000588717 2197 ntBASIC18.02■□□□□ 0.47
MUC4Q99102 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.01■□□□□ 0.47
MUC4Q99102 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.01■□□□□ 0.47
MUC4Q99102 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MUC4Q99102 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms