Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDK5RAP1Q96SZ6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CDK5RAP1Q96SZ6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDK5RAP1Q96SZ6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDK5RAP1Q96SZ6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDK5RAP1Q96SZ6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDK5RAP1Q96SZ6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.06■■□□□ 1.76
CDK5RAP1Q96SZ6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
CDK5RAP1Q96SZ6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CDK5RAP1Q96SZ6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.05■■□□□ 1.76
CDK5RAP1Q96SZ6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDK5RAP1Q96SZ6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDK5RAP1Q96SZ6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDK5RAP1Q96SZ6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDK5RAP1Q96SZ6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.04■■□□□ 1.76
CDK5RAP1Q96SZ6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.04■■□□□ 1.76
CDK5RAP1Q96SZ6 AC092296.2-201ENST00000589470 999 ntBASIC26.04■■□□□ 1.76
CDK5RAP1Q96SZ6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CDK5RAP1Q96SZ6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDK5RAP1Q96SZ6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDK5RAP1Q96SZ6 AL359258.2-201ENST00000564063 1566 ntBASIC26.03■■□□□ 1.76
CDK5RAP1Q96SZ6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
CDK5RAP1Q96SZ6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDK5RAP1Q96SZ6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CDK5RAP1Q96SZ6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CDK5RAP1Q96SZ6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDK5RAP1Q96SZ6 ECEL1P2-201ENST00000461596 1295 ntBASIC26.01■■□□□ 1.75
CDK5RAP1Q96SZ6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDK5RAP1Q96SZ6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDK5RAP1Q96SZ6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CDK5RAP1Q96SZ6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26■■□□□ 1.75
CDK5RAP1Q96SZ6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDK5RAP1Q96SZ6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CDK5RAP1Q96SZ6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDK5RAP1Q96SZ6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CDK5RAP1Q96SZ6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDK5RAP1Q96SZ6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDK5RAP1Q96SZ6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CDK5RAP1Q96SZ6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CDK5RAP1Q96SZ6 ABHD17AP5-201ENST00000580133 923 ntBASIC25.96■■□□□ 1.75
CDK5RAP1Q96SZ6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CDK5RAP1Q96SZ6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.96■■□□□ 1.75
CDK5RAP1Q96SZ6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
CDK5RAP1Q96SZ6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDK5RAP1Q96SZ6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CDK5RAP1Q96SZ6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDK5RAP1Q96SZ6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDK5RAP1Q96SZ6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
CDK5RAP1Q96SZ6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDK5RAP1Q96SZ6 AL157400.5-201ENST00000507624 621 ntBASIC25.93■■□□□ 1.74
CDK5RAP1Q96SZ6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.92■■□□□ 1.74
CDK5RAP1Q96SZ6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.92■■□□□ 1.74
CDK5RAP1Q96SZ6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.92■■□□□ 1.74
CDK5RAP1Q96SZ6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.92■■□□□ 1.74
CDK5RAP1Q96SZ6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDK5RAP1Q96SZ6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDK5RAP1Q96SZ6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDK5RAP1Q96SZ6 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.91■■□□□ 1.74
CDK5RAP1Q96SZ6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.91■■□□□ 1.74
CDK5RAP1Q96SZ6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CDK5RAP1Q96SZ6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.91■■□□□ 1.74
CDK5RAP1Q96SZ6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDK5RAP1Q96SZ6 WHAMMP3-201ENST00000611636 1609 ntBASIC25.9■■□□□ 1.74
CDK5RAP1Q96SZ6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDK5RAP1Q96SZ6 LINC01003-201ENST00000564834 1764 ntBASIC25.9■■□□□ 1.74
CDK5RAP1Q96SZ6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.89■■□□□ 1.74
CDK5RAP1Q96SZ6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CDK5RAP1Q96SZ6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.89■■□□□ 1.74
CDK5RAP1Q96SZ6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.89■■□□□ 1.74
CDK5RAP1Q96SZ6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.89■■□□□ 1.73
CDK5RAP1Q96SZ6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDK5RAP1Q96SZ6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.88■■□□□ 1.73
CDK5RAP1Q96SZ6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CDK5RAP1Q96SZ6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CDK5RAP1Q96SZ6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDK5RAP1Q96SZ6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDK5RAP1Q96SZ6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDK5RAP1Q96SZ6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDK5RAP1Q96SZ6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.85■■□□□ 1.73
CDK5RAP1Q96SZ6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDK5RAP1Q96SZ6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CDK5RAP1Q96SZ6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CDK5RAP1Q96SZ6 AC142086.6-201ENST00000621154 1765 ntBASIC25.84■■□□□ 1.73
CDK5RAP1Q96SZ6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.84■■□□□ 1.73
CDK5RAP1Q96SZ6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.84■■□□□ 1.73
CDK5RAP1Q96SZ6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.84■■□□□ 1.73
CDK5RAP1Q96SZ6 SMPD5-203ENST00000639008 1464 ntBASIC25.84■■□□□ 1.73
CDK5RAP1Q96SZ6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
CDK5RAP1Q96SZ6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDK5RAP1Q96SZ6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.83■■□□□ 1.72
CDK5RAP1Q96SZ6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDK5RAP1Q96SZ6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.82■■□□□ 1.72
CDK5RAP1Q96SZ6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDK5RAP1Q96SZ6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDK5RAP1Q96SZ6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.82■■□□□ 1.72
CDK5RAP1Q96SZ6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CDK5RAP1Q96SZ6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDK5RAP1Q96SZ6 BX255925.1-201ENST00000566954 1854 ntBASIC25.81■■□□□ 1.72
CDK5RAP1Q96SZ6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDK5RAP1Q96SZ6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms