Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NEK1Q96PY6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
NEK1Q96PY6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NEK1Q96PY6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.62■■■□□ 2.33
NEK1Q96PY6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.61■■■□□ 2.33
NEK1Q96PY6 AC008813.1-201ENST00000536597 885 ntBASIC29.61■■■□□ 2.33
NEK1Q96PY6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NEK1Q96PY6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NEK1Q96PY6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.61■■■□□ 2.33
NEK1Q96PY6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
NEK1Q96PY6 MIR3648-2-201ENST00000581792 180 ntBASIC29.6■■■□□ 2.33
NEK1Q96PY6 MIR3648-1-201ENST00000615959 180 ntBASIC29.6■■■□□ 2.33
NEK1Q96PY6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.6■■■□□ 2.33
NEK1Q96PY6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NEK1Q96PY6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
NEK1Q96PY6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.59■■■□□ 2.33
NEK1Q96PY6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
NEK1Q96PY6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
NEK1Q96PY6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.59■■■□□ 2.33
NEK1Q96PY6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.58■■■□□ 2.33
NEK1Q96PY6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NEK1Q96PY6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NEK1Q96PY6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.58■■■□□ 2.33
NEK1Q96PY6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
NEK1Q96PY6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
NEK1Q96PY6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.58■■■□□ 2.33
NEK1Q96PY6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.57■■■□□ 2.32
NEK1Q96PY6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
NEK1Q96PY6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NEK1Q96PY6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NEK1Q96PY6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
NEK1Q96PY6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
NEK1Q96PY6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
NEK1Q96PY6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.55■■■□□ 2.32
NEK1Q96PY6 HLA-V-202ENST00000446817 847 ntBASIC29.55■■■□□ 2.32
NEK1Q96PY6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
NEK1Q96PY6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
NEK1Q96PY6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
NEK1Q96PY6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
NEK1Q96PY6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.53■■■□□ 2.32
NEK1Q96PY6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NEK1Q96PY6 AL449106.1-201ENST00000608517 1980 ntBASIC29.53■■■□□ 2.32
NEK1Q96PY6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NEK1Q96PY6 AC016575.1-201ENST00000607026 382 ntBASIC29.52■■■□□ 2.32
NEK1Q96PY6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NEK1Q96PY6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NEK1Q96PY6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.51■■■□□ 2.31
NEK1Q96PY6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
NEK1Q96PY6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.51■■■□□ 2.31
NEK1Q96PY6 AC148477.6-201ENST00000623746 465 ntBASIC29.51■■■□□ 2.31
NEK1Q96PY6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
NEK1Q96PY6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NEK1Q96PY6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
NEK1Q96PY6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NEK1Q96PY6 MIR219A2-201ENST00000608502 1504 ntBASIC29.5■■■□□ 2.31
NEK1Q96PY6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
NEK1Q96PY6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
NEK1Q96PY6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.49■■■□□ 2.31
NEK1Q96PY6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.49■■■□□ 2.31
NEK1Q96PY6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
NEK1Q96PY6 WHAMMP3-201ENST00000611636 1609 ntBASIC29.49■■■□□ 2.31
NEK1Q96PY6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
NEK1Q96PY6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NEK1Q96PY6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NEK1Q96PY6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
NEK1Q96PY6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.47■■■□□ 2.31
NEK1Q96PY6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.47■■■□□ 2.31
NEK1Q96PY6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.47■■■□□ 2.31
NEK1Q96PY6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.47■■■□□ 2.31
NEK1Q96PY6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
NEK1Q96PY6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.46■■■□□ 2.31
NEK1Q96PY6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
NEK1Q96PY6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NEK1Q96PY6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NEK1Q96PY6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
NEK1Q96PY6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.44■■■□□ 2.3
NEK1Q96PY6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
NEK1Q96PY6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.44■■■□□ 2.3
NEK1Q96PY6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
NEK1Q96PY6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NEK1Q96PY6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
NEK1Q96PY6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.42■■■□□ 2.3
NEK1Q96PY6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NEK1Q96PY6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
NEK1Q96PY6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NEK1Q96PY6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NEK1Q96PY6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NEK1Q96PY6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NEK1Q96PY6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
NEK1Q96PY6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.4■■■□□ 2.3
NEK1Q96PY6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.4■■■□□ 2.3
NEK1Q96PY6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NEK1Q96PY6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NEK1Q96PY6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.39■■■□□ 2.3
NEK1Q96PY6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.39■■■□□ 2.3
NEK1Q96PY6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NEK1Q96PY6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
NEK1Q96PY6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
NEK1Q96PY6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
NEK1Q96PY6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms