Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SEH1LQ96EE3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.58■■□□□ 1.05
SEH1LQ96EE3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SEH1LQ96EE3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SEH1LQ96EE3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.58■■□□□ 1.04
SEH1LQ96EE3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
SEH1LQ96EE3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEH1LQ96EE3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEH1LQ96EE3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEH1LQ96EE3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEH1LQ96EE3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SEH1LQ96EE3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SEH1LQ96EE3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.56■■□□□ 1.04
SEH1LQ96EE3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SEH1LQ96EE3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.56■■□□□ 1.04
SEH1LQ96EE3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.55■■□□□ 1.04
SEH1LQ96EE3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEH1LQ96EE3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEH1LQ96EE3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.55■■□□□ 1.04
SEH1LQ96EE3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SEH1LQ96EE3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.55■■□□□ 1.04
SEH1LQ96EE3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEH1LQ96EE3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SEH1LQ96EE3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.54■■□□□ 1.04
SEH1LQ96EE3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SEH1LQ96EE3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SEH1LQ96EE3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.54■■□□□ 1.04
SEH1LQ96EE3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.53■■□□□ 1.04
SEH1LQ96EE3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SEH1LQ96EE3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SEH1LQ96EE3 AP002414.2-202ENST00000590929 1450 ntBASIC21.52■■□□□ 1.04
SEH1LQ96EE3 ABHD17AP4-201ENST00000411545 909 ntBASIC21.52■■□□□ 1.04
SEH1LQ96EE3 ZNRF2P2-203ENST00000454624 420 ntBASIC21.52■■□□□ 1.04
SEH1LQ96EE3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEH1LQ96EE3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEH1LQ96EE3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SEH1LQ96EE3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.51■■□□□ 1.03
SEH1LQ96EE3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEH1LQ96EE3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SEH1LQ96EE3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SEH1LQ96EE3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.49■■□□□ 1.03
SEH1LQ96EE3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.49■■□□□ 1.03
SEH1LQ96EE3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SEH1LQ96EE3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SEH1LQ96EE3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEH1LQ96EE3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.48■■□□□ 1.03
SEH1LQ96EE3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.48■■□□□ 1.03
SEH1LQ96EE3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.48■■□□□ 1.03
SEH1LQ96EE3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEH1LQ96EE3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.47■■□□□ 1.03
SEH1LQ96EE3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.47■■□□□ 1.03
SEH1LQ96EE3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEH1LQ96EE3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEH1LQ96EE3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.47■■□□□ 1.03
SEH1LQ96EE3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEH1LQ96EE3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.46■■□□□ 1.03
SEH1LQ96EE3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEH1LQ96EE3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.46■■□□□ 1.03
SEH1LQ96EE3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
SEH1LQ96EE3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.45■■□□□ 1.02
SEH1LQ96EE3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SEH1LQ96EE3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SEH1LQ96EE3 AC145676.1-201ENST00000514988 2004 ntBASIC21.45■■□□□ 1.02
SEH1LQ96EE3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SEH1LQ96EE3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEH1LQ96EE3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SEH1LQ96EE3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SEH1LQ96EE3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SEH1LQ96EE3 AC020928.2-201ENST00000588717 2197 ntBASIC21.43■■□□□ 1.02
SEH1LQ96EE3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.43■■□□□ 1.02
SEH1LQ96EE3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEH1LQ96EE3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.43■■□□□ 1.02
SEH1LQ96EE3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEH1LQ96EE3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SEH1LQ96EE3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SEH1LQ96EE3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.42■■□□□ 1.02
SEH1LQ96EE3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEH1LQ96EE3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.41■■□□□ 1.02
SEH1LQ96EE3 LINC01971-201ENST00000617888 1048 ntBASIC21.41■■□□□ 1.02
SEH1LQ96EE3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SEH1LQ96EE3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.41■■□□□ 1.02
SEH1LQ96EE3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEH1LQ96EE3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SEH1LQ96EE3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEH1LQ96EE3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SEH1LQ96EE3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SEH1LQ96EE3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SEH1LQ96EE3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SEH1LQ96EE3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SEH1LQ96EE3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SEH1LQ96EE3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SEH1LQ96EE3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
SEH1LQ96EE3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SEH1LQ96EE3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SEH1LQ96EE3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SEH1LQ96EE3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.38■■□□□ 1.01
SEH1LQ96EE3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.38■■□□□ 1.01
SEH1LQ96EE3 DUX4L11-201ENST00000611504 1267 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms